RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 ANXA1P04083 346 aa22.38■■□□□ 1.17
SLC3A2-213ENST00000539458 FKBP8Q14318 412 aa22.38■■□□□ 1.17
SLC3A2-213ENST00000539458 CCDC30Q5VVM6 783 aa22.38■■□□□ 1.17
SLC3A2-213ENST00000539458 RGL2O15211 777 aa22.37■■□□□ 1.17
SLC3A2-213ENST00000539458 TRMT2AQ8IZ69 625 aaKnown RBP22.37■■□□□ 1.17
SLC3A2-213ENST00000539458 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
SLC3A2-213ENST00000539458 VAMP4O75379 141 aa22.36■■□□□ 1.17
SLC3A2-213ENST00000539458 MMP10P09238 476 aa22.36■■□□□ 1.17
SLC3A2-213ENST00000539458 KIF6Q6ZMV9 814 aa22.36■■□□□ 1.17
SLC3A2-213ENST00000539458 HYPKQ9NX55 129 aa22.36■■□□□ 1.17
SLC3A2-213ENST00000539458 TTLL7Q6ZT98 887 aa22.35■■□□□ 1.17
SLC3A2-213ENST00000539458 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
SLC3A2-213ENST00000539458 MAP3K15Q6ZN16 1313 aa22.34■■□□□ 1.17
SLC3A2-213ENST00000539458 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
SLC3A2-213ENST00000539458 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
SLC3A2-213ENST00000539458 ZNF652Q9Y2D9 606 aa22.34■■□□□ 1.17
SLC3A2-213ENST00000539458 TM4SF1P30408 202 aa22.33■■□□□ 1.17
SLC3A2-213ENST00000539458 COPS6Q7L5N1 327 aa22.33■■□□□ 1.17
SLC3A2-213ENST00000539458 XAGE3Q8WTP9 111 aa22.33■■□□□ 1.17
SLC3A2-213ENST00000539458 STK31Q9BXU1 1019 aa22.33■■□□□ 1.17
SLC3A2-213ENST00000539458 NFIXQ14938 502 aa22.32■■□□□ 1.16
SLC3A2-213ENST00000539458 DDR1Q08345 913 aa22.31■■□□□ 1.16
SLC3A2-213ENST00000539458 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
SLC3A2-213ENST00000539458 TBC1D9BQ66K14 1250 aa22.31■■□□□ 1.16
SLC3A2-213ENST00000539458 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
SLC3A2-213ENST00000539458 PARP3Q9Y6F1 533 aa22.31■■□□□ 1.16
SLC3A2-213ENST00000539458 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
SLC3A2-213ENST00000539458 HLFQ16534 295 aa22.3■■□□□ 1.16
SLC3A2-213ENST00000539458 TCERG1O14776 1098 aaKnown RBP22.29■■□□□ 1.16
SLC3A2-213ENST00000539458 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
SLC3A2-213ENST00000539458 PHAXQ9H814 394 aaKnown RBP22.29■■□□□ 1.16
SLC3A2-213ENST00000539458 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
SLC3A2-213ENST00000539458 NUP98P52948 1817 aa22.29■■□□□ 1.16
SLC3A2-213ENST00000539458 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
SLC3A2-213ENST00000539458 CARMIL3Q8ND23 1372 aa22.28■■□□□ 1.16
SLC3A2-213ENST00000539458 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
SLC3A2-213ENST00000539458 GIGYF2Q6Y7W6 1299 aaKnown RBP22.28■■□□□ 1.16
SLC3A2-213ENST00000539458 CT47B1P0C2W7 299 aaPredicted RBP22.27■■□□□ 1.16
SLC3A2-213ENST00000539458 C1QTNF8P60827 252 aa22.27■■□□□ 1.16
SLC3A2-213ENST00000539458 PLBD2Q8NHP8 589 aa22.27■■□□□ 1.16
SLC3A2-213ENST00000539458 ZNF428Q96B54 188 aa22.27■■□□□ 1.16
SLC3A2-213ENST00000539458 SETDB2Q96T68 719 aa22.27■■□□□ 1.16
SLC3A2-213ENST00000539458 C10orf71Q711Q0 1435 aa22.26■■□□□ 1.15
SLC3A2-213ENST00000539458 ARFGEF2Q9Y6D5 1785 aa22.26■■□□□ 1.15
SLC3A2-213ENST00000539458 ANKRD13DQ6ZTN6 518 aa22.26■■□□□ 1.15
SLC3A2-213ENST00000539458 ANKRD36CQ5JPF3 1778 aa22.25■■□□□ 1.15
SLC3A2-213ENST00000539458 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
SLC3A2-213ENST00000539458 SERPINB2P05120 415 aa22.25■■□□□ 1.15
SLC3A2-213ENST00000539458 NIP7Q9Y221 180 aaKnown RBP eCLIP22.25■■□□□ 1.15
SLC3A2-213ENST00000539458 GRIN3BO60391 1043 aa22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 DDX58O95786 925 aaKnown RBP22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 HSP90AB3PQ58FF7 597 aa22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 CD2APQ9Y5K6 639 aa22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
SLC3A2-213ENST00000539458 ZNF34Q8IZ26 560 aa22.23■■□□□ 1.15
SLC3A2-213ENST00000539458 FLIIQ13045 1269 aa22.22■■□□□ 1.15
SLC3A2-213ENST00000539458 G2E3Q7L622 706 aa22.22■■□□□ 1.15
SLC3A2-213ENST00000539458 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
SLC3A2-213ENST00000539458 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
SLC3A2-213ENST00000539458 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
SLC3A2-213ENST00000539458 UBN2Q6ZU65 1347 aa22.21■■□□□ 1.15
SLC3A2-213ENST00000539458 GPTP24298 496 aa22.2■■□□□ 1.14
SLC3A2-213ENST00000539458 PARP10Q53GL7 1025 aa22.2■■□□□ 1.14
SLC3A2-213ENST00000539458 NBPF5PQ86XG9 351 aaPredicted RBP22.2■■□□□ 1.14
SLC3A2-213ENST00000539458 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
SLC3A2-213ENST00000539458 KSR2Q6VAB6 950 aa22.19■■□□□ 1.14
SLC3A2-213ENST00000539458 CNBD1Q8NA66 436 aa22.19■■□□□ 1.14
SLC3A2-213ENST00000539458 NLGN2Q8NFZ4 835 aa22.19■■□□□ 1.14
SLC3A2-213ENST00000539458 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
SLC3A2-213ENST00000539458 ADCY9O60503 1353 aa22.19■■□□□ 1.14
SLC3A2-213ENST00000539458 KIAA1551Q9HCM1 1747 aa22.18■■□□□ 1.14
SLC3A2-213ENST00000539458 FKBP5Q13451 457 aaPredicted RBP22.18■■□□□ 1.14
SLC3A2-213ENST00000539458 PRR5LQ6MZQ0 368 aa22.18■■□□□ 1.14
SLC3A2-213ENST00000539458 MRPL50Q8N5N7 158 aaKnown RBP22.18■■□□□ 1.14
SLC3A2-213ENST00000539458 PI4KAP2A4QPH2 592 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 NPHP1O15259 732 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 TPTE2Q6XPS3 522 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 PI4KAP1Q8N8J0 262 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 NYXQ9GZU5 481 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 MAP3K2Q9Y2U5 619 aa22.17■■□□□ 1.14
SLC3A2-213ENST00000539458 FAM177BA6PVY3 158 aa22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 ST5P78524 1137 aa22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 SUSD4Q5VX71 490 aa22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 PPP1R42Q7Z4L9 355 aa22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 ISCA1Q9BUE6 129 aa22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 METTL22Q9BUU2 404 aaPredicted RBP22.16■■□□□ 1.14
SLC3A2-213ENST00000539458 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
SLC3A2-213ENST00000539458 TGFB2P61812 414 aa22.15■■□□□ 1.14
SLC3A2-213ENST00000539458 NLRP10Q86W26 655 aa22.15■■□□□ 1.14
SLC3A2-213ENST00000539458 BCL2L13Q9BXK5 485 aa22.15■■□□□ 1.14
SLC3A2-213ENST00000539458 SMC4Q9NTJ3 1288 aa22.15■■□□□ 1.14
SLC3A2-213ENST00000539458 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
SLC3A2-213ENST00000539458 ANKRD31Q8N7Z5 1873 aa22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 NTSR2O95665 410 aa22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 RARSP54136 660 aaKnown RBP22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 TRIM28Q13263 835 aaKnown RBP22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 MYD88Q99836 296 aa22.14■■□□□ 1.13
SLC3A2-213ENST00000539458 BRIP1Q9BX63 1249 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms