RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 RBM46Q8TBY0 533 aaKnown RBP12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
GTF2H3-207ENST00000539429 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 KCNQ2O43526 872 aa12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
GTF2H3-207ENST00000539429 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
GTF2H3-207ENST00000539429 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
GTF2H3-207ENST00000539429 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
GTF2H3-207ENST00000539429 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.37
GTF2H3-207ENST00000539429 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.38
GTF2H3-207ENST00000539429 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.38
GTF2H3-207ENST00000539429 BCL9O00512 1426 aa12.71□□□□□ -0.38
GTF2H3-207ENST00000539429 RREB1Q92766 1687 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 IGSF1Q8N6C5 1336 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 PLEKHO1Q53GL0 409 aaPredicted RBP12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 PTF1AQ7RTS3 328 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 CAMKK2Q96RR4 588 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
GTF2H3-207ENST00000539429 ITGB4P16144 1822 aa12.69□□□□□ -0.38
GTF2H3-207ENST00000539429 PLSCR1O15162 318 aa12.69□□□□□ -0.38
GTF2H3-207ENST00000539429 NUDT18Q6ZVK8 323 aa12.69□□□□□ -0.38
GTF2H3-207ENST00000539429 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
GTF2H3-207ENST00000539429 HMOX1P09601 288 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 IL13P35225 146 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 CLCN1P35523 988 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 TMEM132AQ24JP5 1023 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 TATDN2Q93075 761 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 KIAA1468Q9P260 1216 aa12.68□□□□□ -0.38
GTF2H3-207ENST00000539429 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 CYP27B1O15528 508 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 R3HDM1Q15032 1099 aaKnown RBP12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 NCAPD2Q15021 1401 aa12.67□□□□□ -0.38
GTF2H3-207ENST00000539429 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
GTF2H3-207ENST00000539429 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
GTF2H3-207ENST00000539429 TMUB1Q9BVT8 246 aa12.66□□□□□ -0.38
GTF2H3-207ENST00000539429 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
GTF2H3-207ENST00000539429 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
GTF2H3-207ENST00000539429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
GTF2H3-207ENST00000539429 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
GTF2H3-207ENST00000539429 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
GTF2H3-207ENST00000539429 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
GTF2H3-207ENST00000539429 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
GTF2H3-207ENST00000539429 PHKG2P15735 406 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
GTF2H3-207ENST00000539429 RCCD1A6NED2 376 aa12.63□□□□□ -0.39
GTF2H3-207ENST00000539429 KDRP35968 1356 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 SMAPO00193 183 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 NEFMP07197 916 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 RALBP1Q15311 655 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 DAXXQ9UER7 740 aaPredicted RBP12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 LY75O60449 1722 aa12.62□□□□□ -0.39
GTF2H3-207ENST00000539429 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 TK2O00142 265 aa12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 DNAJB2P25686 324 aa12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 CABP4P57796 275 aa12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
GTF2H3-207ENST00000539429 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF2H3-207ENST00000539429 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
GTF2H3-207ENST00000539429 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
GTF2H3-207ENST00000539429 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
GTF2H3-207ENST00000539429 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
GTF2H3-207ENST00000539429 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
GTF2H3-207ENST00000539429 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 MS4A1P11836 297 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 KCNQ4P56696 695 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 SLC15A2Q16348 729 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 PIGBQ92521 554 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
GTF2H3-207ENST00000539429 C5P01031 1676 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms