RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 COL5A3P25940 1745 aaPredicted RBP11.08□□□□□ -0.64
DDB1-213ENST00000539332 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
DDB1-213ENST00000539332 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 SIK1P57059 783 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 SIRT2Q8IXJ6 389 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
DDB1-213ENST00000539332 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
DDB1-213ENST00000539332 STARD3NLO95772 234 aa11.07□□□□□ -0.64
DDB1-213ENST00000539332 MEIS3Q99687 375 aa11.07□□□□□ -0.64
DDB1-213ENST00000539332 TAF1LQ8IZX4 1826 aa11.07□□□□□ -0.64
DDB1-213ENST00000539332 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 TRIM37O94972 964 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 A1BGP04217 495 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 MYL6BP14649 208 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 ATP6V1AP38606 617 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
DDB1-213ENST00000539332 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
DDB1-213ENST00000539332 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 RREB1Q92766 1687 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
DDB1-213ENST00000539332 CYP19A1P11511 503 aaPredicted RBP11.05□□□□□ -0.64
DDB1-213ENST00000539332 RPAP2Q8IXW5 612 aaPredicted RBP11.05□□□□□ -0.64
DDB1-213ENST00000539332 GCC1Q96CN9 775 aa11.05□□□□□ -0.64
DDB1-213ENST00000539332 ITPK1Q13572 414 aa11.05□□□□□ -0.64
DDB1-213ENST00000539332 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
DDB1-213ENST00000539332 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
DDB1-213ENST00000539332 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
DDB1-213ENST00000539332 GNAI3P08754 354 aa11.04□□□□□ -0.64
DDB1-213ENST00000539332 BEND3Q5T5X7 828 aa11.04□□□□□ -0.64
DDB1-213ENST00000539332 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
DDB1-213ENST00000539332 BACH2Q9BYV9 841 aa11.04□□□□□ -0.64
DDB1-213ENST00000539332 PI4KAP2A4QPH2 592 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 NUCB1Q02818 461 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
DDB1-213ENST00000539332 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 PI4KAP1Q8N8J0 262 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 TNS1Q9HBL0 1735 aaKnown RBP11.03□□□□□ -0.64
DDB1-213ENST00000539332 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 PDE4AP27815 886 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 KCNQ4P56696 695 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 KSR2Q6VAB6 950 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 SRCIN1Q9C0H9 1055 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
DDB1-213ENST00000539332 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 CRKLP46109 303 aaKnown RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
DDB1-213ENST00000539332 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 CCNL1Q9UK58 526 aaPredicted RBP11.02□□□□□ -0.65
DDB1-213ENST00000539332 ZBTB1Q9Y2K1 713 aa11.02□□□□□ -0.65
DDB1-213ENST00000539332 GNAI2P04899 355 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 RGS3P49796 1198 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 LINC00116Q8NCU8 138 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 MAP3K2Q9Y2U5 619 aa11.01□□□□□ -0.65
DDB1-213ENST00000539332 IL6STP40189 918 aaPredicted RBP11□□□□□ -0.65
DDB1-213ENST00000539332 TTLL7Q6ZT98 887 aa11□□□□□ -0.65
DDB1-213ENST00000539332 UTYO14607 1347 aa11□□□□□ -0.65
DDB1-213ENST00000539332 RGPD3A6NKT7 1758 aaPredicted RBP11□□□□□ -0.65
DDB1-213ENST00000539332 RGPD4Q7Z3J3 1758 aa11□□□□□ -0.65
DDB1-213ENST00000539332 NUP98P52948 1817 aa11□□□□□ -0.65
DDB1-213ENST00000539332 FAM161AQ3B820 660 aa11□□□□□ -0.65
DDB1-213ENST00000539332 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
DDB1-213ENST00000539332 LINS1Q8NG48 757 aa11□□□□□ -0.65
DDB1-213ENST00000539332 PLBD2Q8NHP8 589 aa11□□□□□ -0.65
DDB1-213ENST00000539332 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
DDB1-213ENST00000539332 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
DDB1-213ENST00000539332 C4BP0C0L5 1744 aa11□□□□□ -0.65
DDB1-213ENST00000539332 HMMRO75330 724 aa10.99□□□□□ -0.65
DDB1-213ENST00000539332 COL15A1P39059 1388 aa10.99□□□□□ -0.65
DDB1-213ENST00000539332 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
DDB1-213ENST00000539332 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
DDB1-213ENST00000539332 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
DDB1-213ENST00000539332 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
DDB1-213ENST00000539332 PLSCR1O15162 318 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 APBA3O96018 575 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 UBTFL1P0CB47 393 aaPredicted RBP10.98□□□□□ -0.65
DDB1-213ENST00000539332 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
DDB1-213ENST00000539332 MTX1Q13505 466 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 POLA2Q14181 598 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 GSE1Q14687 1217 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 PROM2Q8N271 834 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
DDB1-213ENST00000539332 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 LRRFIP2Q9Y608 721 aaKnown RBP10.98□□□□□ -0.65
DDB1-213ENST00000539332 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
DDB1-213ENST00000539332 IGKV5-2P06315 115 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms