RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
SSPN-206ENST00000539019 FAM157BP0CG42 384 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 DPYDQ12882 1025 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 CHMP3Q9Y3E7 222 aa9.54□□□□□ -0.88
SSPN-206ENST00000539019 DNMT3AQ9Y6K1 912 aaPredicted RBP9.54□□□□□ -0.88
SSPN-206ENST00000539019 CFAP70Q5T0N1 1121 aa9.53□□□□□ -0.88
SSPN-206ENST00000539019 POTEAQ6S8J7 498 aa9.53□□□□□ -0.88
SSPN-206ENST00000539019 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
SSPN-206ENST00000539019 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
SSPN-206ENST00000539019 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
SSPN-206ENST00000539019 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
SSPN-206ENST00000539019 FAM196BA6NMK8 535 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L15C9J2P7 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L10C9JJH3 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L12C9JPN9 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L11C9JVI0 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L21D6R901 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L18D6R9N7 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L22D6RA61 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L19D6RCP7 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L20D6RJB6 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 LGR5O75473 907 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.88
SSPN-206ENST00000539019 USP17L24Q0WX57 530 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 FAM182BQ5T319 152 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 C1orf53Q5VUE5 145 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.88
SSPN-206ENST00000539019 HINFPQ9BQA5 517 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.88
SSPN-206ENST00000539019 EFSO43281 561 aa9.51□□□□□ -0.89
SSPN-206ENST00000539019 ARAFP10398 606 aa9.51□□□□□ -0.89
SSPN-206ENST00000539019 KANK3Q6NY19 840 aa9.51□□□□□ -0.89
SSPN-206ENST00000539019 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
SSPN-206ENST00000539019 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
SSPN-206ENST00000539019 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
SSPN-206ENST00000539019 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 SLCO4C1Q6ZQN7 724 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
SSPN-206ENST00000539019 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
SSPN-206ENST00000539019 KLF15Q9UIH9 416 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 PHF20L1A8MW92 1017 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 SNRPNP63162 240 aaKnown RBP9.5□□□□□ -0.89
SSPN-206ENST00000539019 LAMC2Q13753 1193 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 STAG2Q8N3U4 1231 aa9.5□□□□□ -0.89
SSPN-206ENST00000539019 EPXP11678 715 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 RFX1P22670 979 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 PODNQ7Z5L7 613 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 ALDH16A1Q8IZ83 802 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 ARXQ96QS3 562 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 PRR12Q9ULL5 1215 aa9.49□□□□□ -0.89
SSPN-206ENST00000539019 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
SSPN-206ENST00000539019 GRIN2CQ14957 1233 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 ZNF280CQ8ND82 737 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 HSH2DQ96JZ2 352 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
SSPN-206ENST00000539019 ADH6P28332 368 aa9.47□□□□□ -0.89
SSPN-206ENST00000539019 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
SSPN-206ENST00000539019 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
SSPN-206ENST00000539019 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
SSPN-206ENST00000539019 AMPD1P23109 780 aa9.46□□□□□ -0.9
SSPN-206ENST00000539019 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
SSPN-206ENST00000539019 ZNF468Q5VIY5 522 aaPredicted RBP9.46□□□□□ -0.9
SSPN-206ENST00000539019 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.9
SSPN-206ENST00000539019 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
SSPN-206ENST00000539019 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
SSPN-206ENST00000539019 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
SSPN-206ENST00000539019 IGFBP4P22692 258 aa9.45□□□□□ -0.9
SSPN-206ENST00000539019 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
SSPN-206ENST00000539019 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
SSPN-206ENST00000539019 MKL2Q9ULH7 1088 aa9.44□□□□□ -0.9
SSPN-206ENST00000539019 LINC00114Q6XXX2 140 aa9.43□□□□□ -0.9
SSPN-206ENST00000539019 SYT9Q86SS6 491 aa9.43□□□□□ -0.9
SSPN-206ENST00000539019 SLC30A3Q99726 388 aa9.43□□□□□ -0.9
SSPN-206ENST00000539019 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
SSPN-206ENST00000539019 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
SSPN-206ENST00000539019 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
SSPN-206ENST00000539019 WEE1P30291 646 aa9.41□□□□□ -0.9
SSPN-206ENST00000539019 TYRO3Q06418 890 aa9.41□□□□□ -0.9
SSPN-206ENST00000539019 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
SSPN-206ENST00000539019 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
SSPN-206ENST00000539019 KCNQ4P56696 695 aa9.4□□□□□ -0.9
SSPN-206ENST00000539019 RTN1Q16799 776 aa9.4□□□□□ -0.9
SSPN-206ENST00000539019 KCNH4Q9UQ05 1017 aa9.4□□□□□ -0.9
SSPN-206ENST00000539019 SPEM2Q0P670 501 aa9.39□□□□□ -0.91
SSPN-206ENST00000539019 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
SSPN-206ENST00000539019 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
SSPN-206ENST00000539019 DGKGP49619 791 aa9.38□□□□□ -0.91
SSPN-206ENST00000539019 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
SSPN-206ENST00000539019 HIF1AQ16665 826 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms