RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 AOX1Q06278 1338 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 NPHP3Q7Z494 1330 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 RNF17Q9BXT8 1623 aaKnown RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 ABCC1P33527 1531 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 ZSCAN12O43309 604 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 ERLIN1O75477 346 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 VPS53Q5VIR6 699 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 CCDC70Q6NSX1 233 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 EVI5LQ96CN4 794 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 ERO1AQ96HE7 468 aa8.02□□□□□ -1.12
SCAPER-203ENST00000538941 FAM135BQ49AJ0 1406 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 TUBB4AP04350 444 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 CYP2E1P05181 493 aaPredicted RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 CUL4AQ13619 759 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 DHX37Q8IY37 1157 aaKnown RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 TXLNBQ8N3L3 684 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 IQGAP1P46940 1657 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 MAP3K4Q9Y6R4 1608 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 POLR3GO15318 223 aaPredicted RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 DHX16O60231 1041 aaKnown RBP8.02□□□□□ -1.13
SCAPER-203ENST00000538941 WAPLQ7Z5K2 1190 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 TXNDC2Q86VQ3 553 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 SIRT2Q8IXJ6 389 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 NECAB1Q8N987 351 aa8.02□□□□□ -1.13
SCAPER-203ENST00000538941 URI1O94763 535 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 PPP1R42Q7Z4L9 355 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 ZSCAN16Q9H4T2 348 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 ECHDC1Q9NTX5 307 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 CLTCL1P53675 1640 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 HSPA4P34932 840 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 ZNF75DP51815 510 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 MAPK8IP2Q13387 824 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 IDI1Q13907 227 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 CREBRFQ8IUR6 639 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 V9GYY5 206 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 PIK3R4Q99570 1358 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 CCAR1Q8IX12 1150 aaKnown RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 FAM177A1Q8N128 213 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 JMYQ8N9B5 988 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 CDC42BPBQ9Y5S2 1711 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 CCDC69A6NI79 296 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 WASLO00401 505 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 TMC6Q7Z403 805 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 IPO4Q8TEX9 1081 aaKnown RBP8.01□□□□□ -1.13
SCAPER-203ENST00000538941 TRERF1Q96PN7 1200 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 SNX14Q9Y5W7 946 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 RAD50Q92878 1312 aa8.01□□□□□ -1.13
SCAPER-203ENST00000538941 KIF1BO60333 1816 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 SYCP1Q15431 976 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 KRT24Q2M2I5 525 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 KIAA1524Q8TCG1 905 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 HMG20BQ9P0W2 317 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 PALD1Q9ULE6 856 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 PYCARDQ9ULZ3 195 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 SPHKAPQ2M3C7 1700 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 TET3O43151 1660 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 SOS1Q07889 1333 aaPredicted RBP8□□□□□ -1.13
SCAPER-203ENST00000538941 IL13P35225 146 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 ANKRD20A12PQ8NF67 263 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 OSBPL3Q9H4L5 887 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 CBX8Q9HC52 389 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 CASQ1P31415 396 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 TRDNQ13061 729 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 RALYLQ86SE5 291 aaKnown RBP8□□□□□ -1.13
SCAPER-203ENST00000538941 FSIP1Q8NA03 581 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 CFAP100Q494V2 611 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 EID1Q9Y6B2 187 aa8□□□□□ -1.13
SCAPER-203ENST00000538941 TTC41PQ6P2S7 1318 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 RUFY3Q7L099 469 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 CLSTN2Q9H4D0 955 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 SRRTQ9BXP5 876 aaKnown RBP7.99□□□□□ -1.13
SCAPER-203ENST00000538941 ZDHHC9Q9Y397 364 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 RBM8AQ9Y5S9 174 aaKnown RBP7.99□□□□□ -1.13
SCAPER-203ENST00000538941 SGSM2O43147 1006 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 AIMP1Q12904 312 aaKnown RBP7.99□□□□□ -1.13
SCAPER-203ENST00000538941 TMEM87AQ8NBN3 555 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 KIAA0232Q92628 1395 aa7.99□□□□□ -1.13
SCAPER-203ENST00000538941 GOLGA6L9A6NEM1 432 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 TAF7Q15545 349 aaPredicted RBP7.98□□□□□ -1.13
SCAPER-203ENST00000538941 DNAAF4Q8WXU2 420 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 SIL1Q9H173 461 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 SPTLC3Q9NUV7 552 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 NLRP6P59044 892 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 SMARCE1Q969G3 411 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 UGGT1Q9NYU2 1555 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 CHL1O00533 1208 aa7.98□□□□□ -1.13
SCAPER-203ENST00000538941 IPO7O95373 1038 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms