RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
CPNE8-203ENST00000538596 PDLIM2Q96JY6 352 aa14.44□□□□□ -0.1
CPNE8-203ENST00000538596 ZNF142P52746 1687 aaPredicted RBP14.44□□□□□ -0.1
CPNE8-203ENST00000538596 DIAPH3Q9NSV4 1193 aa14.44□□□□□ -0.1
CPNE8-203ENST00000538596 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 CNPY2Q9Y2B0 182 aa14.43□□□□□ -0.1
CPNE8-203ENST00000538596 CHD2O14647 1828 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 HSP90AB4PQ58FF6 505 aa14.43□□□□□ -0.1
CPNE8-203ENST00000538596 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
CPNE8-203ENST00000538596 KSR2Q6VAB6 950 aa14.43□□□□□ -0.1
CPNE8-203ENST00000538596 ARHGEF25Q86VW2 580 aa14.43□□□□□ -0.1
CPNE8-203ENST00000538596 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
CPNE8-203ENST00000538596 AACSQ86V21 672 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 SUCLG2Q96I99 432 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
CPNE8-203ENST00000538596 SLC39A6Q13433 755 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 MTX1Q13505 466 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 ECHDC1Q9NTX5 307 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 TTC41PQ6P2S7 1318 aa14.42□□□□□ -0.1
CPNE8-203ENST00000538596 HSPA2P54652 639 aa14.41□□□□□ -0.1
CPNE8-203ENST00000538596 AMOTQ4VCS5 1084 aa14.41□□□□□ -0.1
CPNE8-203ENST00000538596 CCDC8Q9H0W5 538 aaPredicted RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 SIL1Q9H173 461 aa14.41□□□□□ -0.1
CPNE8-203ENST00000538596 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
CPNE8-203ENST00000538596 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 EPB41L2O43491 1005 aaKnown RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 SYT1P21579 422 aa14.41□□□□□ -0.1
CPNE8-203ENST00000538596 JAKMIP1Q96N16 626 aaKnown RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 BICC1Q9H694 974 aaKnown RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 TLR7Q9NYK1 1049 aaKnown RBP14.41□□□□□ -0.1
CPNE8-203ENST00000538596 SASH1O94885 1247 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 CCDC83Q8IWF9 413 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 HYPKQ9NX55 129 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 EAF2Q96CJ1 260 aaPredicted RBP14.4□□□□□ -0.1
CPNE8-203ENST00000538596 STX6O43752 255 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 ALDH1L1O75891 902 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
CPNE8-203ENST00000538596 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 GRM8O00222 908 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 ZSCAN22P10073 491 aaPredicted RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 MPNDQ8N594 471 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 JARID2Q92833 1246 aaPredicted RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 NOL7Q9UMY1 257 aaKnown RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 NPHP4O75161 1426 aaPredicted RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 CRYBG1Q9Y4K1 1723 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 MYL6BP14649 208 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
CPNE8-203ENST00000538596 SMC3Q9UQE7 1217 aa14.39□□□□□ -0.11
CPNE8-203ENST00000538596 HEG1Q9ULI3 1381 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 FIBPO43427 364 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 PDIA6Q15084 440 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 IGKV5-2P06315 115 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 NECAB1Q8N987 351 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
CPNE8-203ENST00000538596 GJB2P29033 226 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 ST3GAL1Q11201 340 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 LINS1Q8NG48 757 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
CPNE8-203ENST00000538596 RUFY2Q8WXA3 655 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.37□□□□□ -0.11
CPNE8-203ENST00000538596 TAF6LQ9Y6J9 622 aa14.37□□□□□ -0.11
CPNE8-203ENST00000538596 OFD1O75665 1012 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 F13A1P00488 732 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
CPNE8-203ENST00000538596 EVI5LQ96CN4 794 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
CPNE8-203ENST00000538596 CCDC171Q6TFL3 1326 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 G3BP1Q13283 466 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPNE8-203ENST00000538596 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 ME3Q16798 604 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 EPHA10Q5JZY3 1008 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 RIC3Q7Z5B4 369 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 ERC1Q8IUD2 1116 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
CPNE8-203ENST00000538596 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPNE8-203ENST00000538596 A0A0D9SFI3 127 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 KCNJ4P48050 445 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
CPNE8-203ENST00000538596 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
CPNE8-203ENST00000538596 RGPD5Q99666 1765 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 NFATC2IPQ8NCF5 419 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms