RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 LTBP3Q9NS15 1303 aa11.46□□□□□ -0.57
DDB1-212ENST00000538470 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.57
DDB1-212ENST00000538470 NPHP1O15259 732 aa11.46□□□□□ -0.57
DDB1-212ENST00000538470 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
DDB1-212ENST00000538470 NFKBIEO00221 500 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 FSTL1Q12841 308 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 NFE2L2Q16236 605 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 SOGA3Q5TF21 947 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 STYK1Q6J9G0 422 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
DDB1-212ENST00000538470 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
DDB1-212ENST00000538470 RALBP1Q15311 655 aa11.44□□□□□ -0.58
DDB1-212ENST00000538470 CNKSR1Q969H4 720 aa11.44□□□□□ -0.58
DDB1-212ENST00000538470 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDB1-212ENST00000538470 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
DDB1-212ENST00000538470 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
DDB1-212ENST00000538470 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
DDB1-212ENST00000538470 SRGNP10124 158 aa11.43□□□□□ -0.58
DDB1-212ENST00000538470 PIP4K2AP48426 406 aaPredicted RBP11.43□□□□□ -0.58
DDB1-212ENST00000538470 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
DDB1-212ENST00000538470 NBPF5PQ86XG9 351 aaPredicted RBP11.43□□□□□ -0.58
DDB1-212ENST00000538470 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
DDB1-212ENST00000538470 MASTLQ96GX5 879 aa11.43□□□□□ -0.58
DDB1-212ENST00000538470 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
DDB1-212ENST00000538470 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
DDB1-212ENST00000538470 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
DDB1-212ENST00000538470 PRELPP51888 382 aa11.42□□□□□ -0.58
DDB1-212ENST00000538470 PRPF40BQ6NWY9 871 aaKnown RBP11.42□□□□□ -0.58
DDB1-212ENST00000538470 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDB1-212ENST00000538470 SCN4AP35499 1836 aa11.42□□□□□ -0.58
DDB1-212ENST00000538470 C21orf2O43822 256 aa11.41□□□□□ -0.58
DDB1-212ENST00000538470 NPR1P16066 1061 aa11.41□□□□□ -0.58
DDB1-212ENST00000538470 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
DDB1-212ENST00000538470 SMC1BQ8NDV3 1235 aa11.41□□□□□ -0.58
DDB1-212ENST00000538470 TAOK3Q9H2K8 898 aa11.41□□□□□ -0.58
DDB1-212ENST00000538470 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
DDB1-212ENST00000538470 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
DDB1-212ENST00000538470 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
DDB1-212ENST00000538470 ERVV-1B6SEH8 477 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 LMOD3Q0VAK6 560 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 NYXQ9GZU5 481 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 BABAM1Q9NWV8 329 aa11.4□□□□□ -0.58
DDB1-212ENST00000538470 MAP3K15Q6ZN16 1313 aa11.39□□□□□ -0.59
DDB1-212ENST00000538470 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
DDB1-212ENST00000538470 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
DDB1-212ENST00000538470 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
DDB1-212ENST00000538470 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
DDB1-212ENST00000538470 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
DDB1-212ENST00000538470 HLFQ16534 295 aa11.38□□□□□ -0.59
DDB1-212ENST00000538470 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
DDB1-212ENST00000538470 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
DDB1-212ENST00000538470 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
DDB1-212ENST00000538470 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
DDB1-212ENST00000538470 LAMB2P55268 1798 aa11.37□□□□□ -0.59
DDB1-212ENST00000538470 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
DDB1-212ENST00000538470 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
DDB1-212ENST00000538470 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
DDB1-212ENST00000538470 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
DDB1-212ENST00000538470 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDB1-212ENST00000538470 CRY2Q49AN0 593 aa11.36□□□□□ -0.59
DDB1-212ENST00000538470 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
DDB1-212ENST00000538470 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 MYL6BP14649 208 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
DDB1-212ENST00000538470 RIPK4P57078 832 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 GIGYF2Q6Y7W6 1299 aaKnown RBP11.35□□□□□ -0.59
DDB1-212ENST00000538470 RTKN2Q8IZC4 609 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
DDB1-212ENST00000538470 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
DDB1-212ENST00000538470 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
DDB1-212ENST00000538470 FAM177BA6PVY3 158 aa11.34□□□□□ -0.59
DDB1-212ENST00000538470 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
DDB1-212ENST00000538470 TTLL7Q6ZT98 887 aa11.34□□□□□ -0.59
DDB1-212ENST00000538470 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
DDB1-212ENST00000538470 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
DDB1-212ENST00000538470 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 POTECB2RU33 542 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 NTSR2O95665 410 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 GPTP24298 496 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDB1-212ENST00000538470 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 LRP10Q7Z4F1 713 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 JMYQ8N9B5 988 aa11.33□□□□□ -0.6
DDB1-212ENST00000538470 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
DDB1-212ENST00000538470 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
DDB1-212ENST00000538470 PDIA6Q15084 440 aa11.32□□□□□ -0.6
DDB1-212ENST00000538470 HSP90AB3PQ58FF7 597 aa11.32□□□□□ -0.6
DDB1-212ENST00000538470 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
DDB1-212ENST00000538470 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
DDB1-212ENST00000538470 RPGRQ92834 1020 aaKnown RBP11.32□□□□□ -0.6
DDB1-212ENST00000538470 RUNDC1Q96C34 613 aa11.32□□□□□ -0.6
DDB1-212ENST00000538470 PSMD1Q99460 953 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms