RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 STAP2Q9UGK3 403 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 MRC1P22897 1456 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 PNMA6EA0A0J9YXQ4 647 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
DDB1-211ENST00000538280 POLA2Q14181 598 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 TXNRD1Q16881 649 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 ZNF784Q8NCA9 323 aaPredicted RBP11.39□□□□□ -0.59
DDB1-211ENST00000538280 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
DDB1-211ENST00000538280 C5P01031 1676 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
DDB1-211ENST00000538280 ADCY9O60503 1353 aa11.39□□□□□ -0.59
DDB1-211ENST00000538280 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
DDB1-211ENST00000538280 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
DDB1-211ENST00000538280 LRRCC1Q9C099 1032 aa11.38□□□□□ -0.59
DDB1-211ENST00000538280 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
DDB1-211ENST00000538280 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
DDB1-211ENST00000538280 ERBB3P21860 1342 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 KCNQ3O43525 872 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
DDB1-211ENST00000538280 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 BEND3Q5T5X7 828 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 ACSBG1Q96GR2 724 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 RBM42Q9BTD8 480 aaKnown RBP11.37□□□□□ -0.59
DDB1-211ENST00000538280 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
DDB1-211ENST00000538280 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 RAB11FIP3O75154 756 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 UBTFL1P0CB47 393 aaPredicted RBP11.36□□□□□ -0.59
DDB1-211ENST00000538280 TEFQ10587 303 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 CLEC17AQ6ZS10 378 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 SYT17Q9BSW7 474 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 STK32BQ9NY57 414 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 CHPF2Q9P2E5 772 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
DDB1-211ENST00000538280 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
DDB1-211ENST00000538280 LY75O60449 1722 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 DDX11L8A8MPP1 907 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 ERC2O15083 957 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 EPB41L2O43491 1005 aaKnown RBP11.35□□□□□ -0.59
DDB1-211ENST00000538280 ALDH1L1O75891 902 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 REC8O95072 547 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 MX1P20591 662 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 MTX1Q13505 466 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 C1orf141Q5JVX7 400 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 LAMB4A4D0S4 1761 aa11.35□□□□□ -0.59
DDB1-211ENST00000538280 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
DDB1-211ENST00000538280 APBB1O00213 710 aa11.34□□□□□ -0.59
DDB1-211ENST00000538280 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
DDB1-211ENST00000538280 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
DDB1-211ENST00000538280 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
DDB1-211ENST00000538280 AK9Q5TCS8 1911 aa11.34□□□□□ -0.59
DDB1-211ENST00000538280 MEGF6O75095 1541 aa11.34□□□□□ -0.59
DDB1-211ENST00000538280 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
DDB1-211ENST00000538280 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
DDB1-211ENST00000538280 ESYT1Q9BSJ8 1104 aa11.33□□□□□ -0.6
DDB1-211ENST00000538280 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
DDB1-211ENST00000538280 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
DDB1-211ENST00000538280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDB1-211ENST00000538280 UTYO14607 1347 aa11.33□□□□□ -0.6
DDB1-211ENST00000538280 FSD2A1L4K1 749 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
DDB1-211ENST00000538280 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
DDB1-211ENST00000538280 PTMSP20962 102 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 CHMLP26374 656 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
DDB1-211ENST00000538280 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
DDB1-211ENST00000538280 EXOC5O00471 708 aa11.31□□□□□ -0.6
DDB1-211ENST00000538280 NBPF7P0C2Y1 421 aaPredicted RBP11.31□□□□□ -0.6
DDB1-211ENST00000538280 ANAPC15P60006 121 aa11.31□□□□□ -0.6
DDB1-211ENST00000538280 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
DDB1-211ENST00000538280 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
DDB1-211ENST00000538280 TRAK2O60296 914 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 KCNQ4P56696 695 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
DDB1-211ENST00000538280 PI4K2BQ8TCG2 481 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 ARXQ96QS3 562 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
DDB1-211ENST00000538280 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 ST18O60284 1047 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 PHKG2P15735 406 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 PDIA6Q15084 440 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms