RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 COL23A1Q86Y22 540 aaPredicted RBP8.95□□□□□ -0.98
MSH6-209ENST00000538136 PARD3Q8TEW0 1356 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 VAMP4O75379 141 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 TRIM27P14373 513 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 USP19O94966 1318 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 RRP1P56182 461 aaKnown RBP8.95□□□□□ -0.98
MSH6-209ENST00000538136 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 UBR1Q8IWV7 1749 aa8.95□□□□□ -0.98
MSH6-209ENST00000538136 VWDEQ8N2E2 1590 aa8.94□□□□□ -0.98
MSH6-209ENST00000538136 JDP2Q8WYK2 163 aa8.94□□□□□ -0.98
MSH6-209ENST00000538136 NBPF7P0C2Y1 421 aaPredicted RBP8.94□□□□□ -0.98
MSH6-209ENST00000538136 TBC1D9BQ66K14 1250 aa8.94□□□□□ -0.98
MSH6-209ENST00000538136 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
MSH6-209ENST00000538136 DDX21Q9NR30 783 aaKnown RBP eCLIP8.94□□□□□ -0.98
MSH6-209ENST00000538136 NLGN1Q8N2Q7 840 aa8.94□□□□□ -0.98
MSH6-209ENST00000538136 KIF16BQ96L93 1317 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 GNAI2P04899 355 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 ERFEQ4G0M1 354 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 RAI14Q9P0K7 980 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 CHL1O00533 1208 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 RAD17O75943 681 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 ZNF827Q17R98 1081 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 VEZTQ9HBM0 779 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 NEURL4Q96JN8 1562 aa8.93□□□□□ -0.98
MSH6-209ENST00000538136 TIMM10P62072 90 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 NFIXQ14938 502 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 AACSQ86V21 672 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 ANKRD18AQ8IVF6 992 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 BOLA2Q9H3K6 86 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 CDC42BPGQ6DT37 1551 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 ADGRB1O14514 1584 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 ANKRD18BA2A2Z9 1011 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 RLBP1P12271 317 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 KSR2Q6VAB6 950 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 NRXN1Q9ULB1 1477 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 FHDC1Q9C0D6 1143 aaPredicted RBP8.92□□□□□ -0.98
MSH6-209ENST00000538136 DBNDD1Q9H9R9 158 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 LRP2BPQ9P2M1 347 aa8.92□□□□□ -0.98
MSH6-209ENST00000538136 UFL1O94874 794 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 C16orf71Q8IYS4 520 aaPredicted RBP8.91□□□□□ -0.98
MSH6-209ENST00000538136 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
MSH6-209ENST00000538136 MED14O60244 1454 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 GNAI3P08754 354 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
MSH6-209ENST00000538136 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 DDX19BQ9UMR2 479 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 PPIP5K2O43314 1243 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 RRP12Q5JTH9 1297 aaKnown RBP8.91□□□□□ -0.98
MSH6-209ENST00000538136 CLASRPQ8N2M8 674 aaKnown RBP8.91□□□□□ -0.98
MSH6-209ENST00000538136 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 REREQ9P2R6 1566 aa8.91□□□□□ -0.98
MSH6-209ENST00000538136 PLEKHF1Q96S99 279 aa8.9□□□□□ -0.98
MSH6-209ENST00000538136 GRM8O00222 908 aa8.9□□□□□ -0.98
MSH6-209ENST00000538136 SUSD4Q5VX71 490 aa8.9□□□□□ -0.98
MSH6-209ENST00000538136 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
MSH6-209ENST00000538136 CYP19A1P11511 503 aaPredicted RBP8.9□□□□□ -0.98
MSH6-209ENST00000538136 DPP8Q6V1X1 898 aaPredicted RBP8.9□□□□□ -0.98
MSH6-209ENST00000538136 ZNF277Q9NRM2 450 aaPredicted RBP8.9□□□□□ -0.98
MSH6-209ENST00000538136 ZC3H13Q5T200 1668 aaKnown RBP8.9□□□□□ -0.99
MSH6-209ENST00000538136 OVOS2A0A0G2JMS6 1433 aa8.9□□□□□ -0.99
MSH6-209ENST00000538136 OVOS2A0A0J9YW53 1432 aa8.9□□□□□ -0.99
MSH6-209ENST00000538136 OVOS2Q6IE36 1432 aa8.9□□□□□ -0.99
MSH6-209ENST00000538136 RPS6KA4O75676 772 aa8.9□□□□□ -0.99
MSH6-209ENST00000538136 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.99
MSH6-209ENST00000538136 TTC39AQ5SRH9 613 aa8.9□□□□□ -0.99
MSH6-209ENST00000538136 ITGA6P23229 1130 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
MSH6-209ENST00000538136 CCDC152Q4G0S7 254 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 BICC1Q9H694 974 aaKnown RBP8.89□□□□□ -0.99
MSH6-209ENST00000538136 MFAP1P55081 439 aaKnown RBP8.89□□□□□ -0.99
MSH6-209ENST00000538136 NOL10Q9BSC4 688 aaKnown RBP8.89□□□□□ -0.99
MSH6-209ENST00000538136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.995e-7■■■□□ 15
MSH6-209ENST00000538136 HDAC5Q9UQL6 1122 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 MEGF6O75095 1541 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 KIAA0825Q8IV33 1275 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 RNF181Q9P0P0 153 aa8.89□□□□□ -0.99
MSH6-209ENST00000538136 PICALMQ13492 652 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 CDC5LQ99459 802 aaKnown RBP8.88□□□□□ -0.99
MSH6-209ENST00000538136 CCT4P50991 539 aaKnown RBP8.88□□□□□ -0.99
MSH6-209ENST00000538136 PIBF1Q8WXW3 757 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 FOXD4L1Q9NU39 408 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 CAMTA1Q9Y6Y1 1673 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 DHX16O60231 1041 aaKnown RBP8.88□□□□□ -0.99
MSH6-209ENST00000538136 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 DPEP1P16444 411 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 SCNN1DP51172 638 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 WDR78Q5VTH9 848 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 PUS3Q9BZE2 481 aaKnown RBP8.88□□□□□ -0.99
MSH6-209ENST00000538136 CHMP4BQ9H444 224 aaKnown RBP8.88□□□□□ -0.99
MSH6-209ENST00000538136 GREM2Q9H772 168 aa8.88□□□□□ -0.99
MSH6-209ENST00000538136 TCIRG1Q13488 830 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 DCCP43146 1447 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms