RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 HYPKQ9NX55 129 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 PXDNQ92626 1479 aa10.52□□□□□ -0.72
UBE3B-208ENST00000538070 TMEM94Q12767 1356 aa10.52□□□□□ -0.72
UBE3B-208ENST00000538070 ERBB3P21860 1342 aa10.52□□□□□ -0.72
UBE3B-208ENST00000538070 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.72
UBE3B-208ENST00000538070 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.72
UBE3B-208ENST00000538070 A0A087WZG4 1122 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-208ENST00000538070 DDIT3P35638 169 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-208ENST00000538070 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-208ENST00000538070 CHGBP05060 677 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 PTH1RQ03431 593 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 EPHA10Q5JZY3 1008 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 IFNL2Q8IZJ0 200 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 NECAB1Q8N987 351 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-208ENST00000538070 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.73
UBE3B-208ENST00000538070 ADGRL3Q9HAR2 1447 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 GLRX3O76003 335 aaKnown RBP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 PI4K2BQ8TCG2 481 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 EAF2Q96CJ1 260 aaPredicted RBP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 CHMP4AQ9BY43 222 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 SYCE3A1L190 88 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 FGD1P98174 961 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 LINS1Q8NG48 757 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 SLC52A2Q9HAB3 445 aa10.51□□□□□ -0.73
UBE3B-208ENST00000538070 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
UBE3B-208ENST00000538070 NPHP3Q7Z494 1330 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 FIBPO43427 364 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 A1BGP04217 495 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 PHKG2P15735 406 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 ZDHHC9Q9Y397 364 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 CYP27B1O15528 508 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 IGKV5-2P06315 115 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 POLA2Q14181 598 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 FERMT3Q86UX7 667 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 CWC22Q9HCG8 908 aaKnown RBP10.5□□□□□ -0.73
UBE3B-208ENST00000538070 CEMIPQ8WUJ3 1361 aa10.5□□□□□ -0.73
UBE3B-208ENST00000538070 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 SGSM2O43147 1006 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 AK2P54819 239 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 SNX14Q9Y5W7 946 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 SLFNL1Q499Z3 407 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
UBE3B-208ENST00000538070 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-208ENST00000538070 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
UBE3B-208ENST00000538070 SASH1O94885 1247 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 SNRPA1P09661 255 aaKnown RBP10.48□□□□□ -0.73
UBE3B-208ENST00000538070 TFCP2Q12800 502 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 CCDC129Q6ZRS4 1044 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 LMBRD1Q9NUN5 540 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 SALL3Q9BXA9 1300 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 TOPAZ1Q8N9V7 1692 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 LMBR1LQ6UX01 489 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-208ENST00000538070 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 NEURL1BA8MQ27 555 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 ALDH1L1O75891 902 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-208ENST00000538070 ZSCAN23Q3MJ62 389 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 TTLL7Q6ZT98 887 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 PDRG1Q9NUG6 133 aa10.48□□□□□ -0.73
UBE3B-208ENST00000538070 FSD2A1L4K1 749 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 HOXB7P09629 217 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 GCKRQ14397 625 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 GADD45BO75293 160 aaPredicted RBP10.47□□□□□ -0.73
UBE3B-208ENST00000538070 LARGE1O95461 756 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
UBE3B-208ENST00000538070 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
UBE3B-208ENST00000538070 KLHL40Q2TBA0 621 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 CADPS2Q86UW7 1296 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 GPT2Q8TD30 523 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 KAZALD1Q96I82 304 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 TIMM10P62072 90 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 SEC62Q99442 399 aaKnown RBP10.47□□□□□ -0.73
UBE3B-208ENST00000538070 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
UBE3B-208ENST00000538070 RBM8AQ9Y5S9 174 aaKnown RBP10.47□□□□□ -0.73
UBE3B-208ENST00000538070 NCOA3Q9Y6Q9 1424 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 HSPA4P34932 840 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 COL9A3Q14050 684 aaPredicted RBP10.46□□□□□ -0.73
UBE3B-208ENST00000538070 PDIA6Q15084 440 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 A0A0D9SFI3 127 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 FAM173BQ6P4H8 233 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 LSG1Q9H089 658 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms