RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 CDKL5O76039 1030 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.515e-10■■■■□ 19.6
GGA3-201ENST00000537686 ZSCAN29Q8IWY8 852 aaPredicted RBP11.87□□□□□ -0.51
GGA3-201ENST00000537686 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 IL27Q8NEV9 243 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 ALKQ9UM73 1620 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 SYNMO15061 1565 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 ZPR1O75312 459 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 EPS15P42566 896 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 GPS2Q13227 327 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 LDHAL6AQ6ZMR3 332 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
GGA3-201ENST00000537686 NAPBQ9H115 298 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
GGA3-201ENST00000537686 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
GGA3-201ENST00000537686 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 MSH6P52701 1360 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 CAVIN4Q5BKX8 364 aa11.85□□□□□ -0.51
GGA3-201ENST00000537686 SERPINC1P01008 464 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
GGA3-201ENST00000537686 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
GGA3-201ENST00000537686 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 LRRC59Q96AG4 307 aaKnown RBP11.84□□□□□ -0.51
GGA3-201ENST00000537686 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 MAP3K12Q12852 859 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
GGA3-201ENST00000537686 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
GGA3-201ENST00000537686 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
GGA3-201ENST00000537686 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 GOLIM4O00461 696 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 IL13P35225 146 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
GGA3-201ENST00000537686 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 INSRP06213 1382 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 RLBP1P12271 317 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
GGA3-201ENST00000537686 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
GGA3-201ENST00000537686 CT47A1Q5JQC4 288 aaPredicted RBP11.83□□□□□ -0.52
GGA3-201ENST00000537686 ZHX3Q9H4I2 956 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 PRM3Q9NNZ6 103 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 LIMCH1Q9UPQ0 1083 aa11.83□□□□□ -0.52
GGA3-201ENST00000537686 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
GGA3-201ENST00000537686 SYCE3A1L190 88 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 GCP02774 474 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 SSFA2P28290 1259 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
GGA3-201ENST00000537686 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 FILIP1Q7Z7B0 1213 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 EVI5LQ96CN4 794 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 EYA1Q99502 592 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
GGA3-201ENST00000537686 SH2B1Q9NRF2 756 aaPredicted RBP11.82□□□□□ -0.52
GGA3-201ENST00000537686 FLT4P35916 1363 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 SETBP1Q9Y6X0 1596 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 VAMP4O75379 141 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 CEP57L1Q8IYX8 460 aa11.82□□□□□ -0.52
GGA3-201ENST00000537686 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
GGA3-201ENST00000537686 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
GGA3-201ENST00000537686 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 TBC1D32Q96NH3 1257 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 ZNF213O14771 459 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 NPHP4O75161 1426 aaPredicted RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 SLC5A1P13866 664 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 SDSP20132 328 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 USP5P45974 858 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 NUCB1Q02818 461 aa11.81□□□□□ -0.52
GGA3-201ENST00000537686 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 ZCRB1Q8TBF4 217 aaKnown RBP11.81□□□□□ -0.52
GGA3-201ENST00000537686 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 MKNK2Q9HBH9 465 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms