RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
CCDC170-202ENST00000537358 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
CCDC170-202ENST00000537358 LMNB1P20700 586 aa13.01□□□□□ -0.33
CCDC170-202ENST00000537358 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
CCDC170-202ENST00000537358 NMRK2Q9NPI5 230 aa13.01□□□□□ -0.33
CCDC170-202ENST00000537358 USP16Q9Y5T5 823 aa13.01□□□□□ -0.33
CCDC170-202ENST00000537358 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
CCDC170-202ENST00000537358 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 CAMTA2O94983 1202 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 APLP1P51693 650 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 DCTN1Q14203 1278 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 PRR5LQ6MZQ0 368 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 CEP350Q5VT06 3117 aa13□□□□□ -0.33
CCDC170-202ENST00000537358 RASSF7Q02833 373 aa12.99□□□□□ -0.33
CCDC170-202ENST00000537358 POLA2Q14181 598 aa12.99□□□□□ -0.33
CCDC170-202ENST00000537358 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
CCDC170-202ENST00000537358 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
CCDC170-202ENST00000537358 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
CCDC170-202ENST00000537358 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
CCDC170-202ENST00000537358 CACNA1SQ13698 1873 aa12.98□□□□□ -0.33
CCDC170-202ENST00000537358 RGL2O15211 777 aa12.98□□□□□ -0.33
CCDC170-202ENST00000537358 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
CCDC170-202ENST00000537358 TIAM2Q8IVF5 1701 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
CCDC170-202ENST00000537358 FSTL1Q12841 308 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 RALBP1Q15311 655 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
CCDC170-202ENST00000537358 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
CCDC170-202ENST00000537358 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.33
CCDC170-202ENST00000537358 C21orf2O43822 256 aa12.96□□□□□ -0.33
CCDC170-202ENST00000537358 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
CCDC170-202ENST00000537358 STYK1Q6J9G0 422 aa12.96□□□□□ -0.33
CCDC170-202ENST00000537358 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
CCDC170-202ENST00000537358 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC170-202ENST00000537358 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
CCDC170-202ENST00000537358 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
CCDC170-202ENST00000537358 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.34
CCDC170-202ENST00000537358 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.34
CCDC170-202ENST00000537358 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
CCDC170-202ENST00000537358 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
CCDC170-202ENST00000537358 VEGFAP15692 232 aaPredicted RBP12.95□□□□□ -0.34
CCDC170-202ENST00000537358 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
CCDC170-202ENST00000537358 NFKBIEO00221 500 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 SRGNP10124 158 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 KIF6Q6ZMV9 814 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
CCDC170-202ENST00000537358 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 SLX4Q8IY92 1834 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 ABCB7O75027 752 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 NPR1P16066 1061 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
CCDC170-202ENST00000537358 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
CCDC170-202ENST00000537358 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
CCDC170-202ENST00000537358 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
CCDC170-202ENST00000537358 NGEFQ8N5V2 710 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
CCDC170-202ENST00000537358 NUP98P52948 1817 aa12.92□□□□□ -0.34
CCDC170-202ENST00000537358 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
CCDC170-202ENST00000537358 RIPK4P57078 832 aa12.91□□□□□ -0.34
CCDC170-202ENST00000537358 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
CCDC170-202ENST00000537358 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
CCDC170-202ENST00000537358 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
CCDC170-202ENST00000537358 MYL6BP14649 208 aa12.9□□□□□ -0.34
CCDC170-202ENST00000537358 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
CCDC170-202ENST00000537358 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
CCDC170-202ENST00000537358 PRELPP51888 382 aa12.89□□□□□ -0.35
CCDC170-202ENST00000537358 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
CCDC170-202ENST00000537358 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC170-202ENST00000537358 HLFQ16534 295 aa12.89□□□□□ -0.35
CCDC170-202ENST00000537358 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
CCDC170-202ENST00000537358 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
CCDC170-202ENST00000537358 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
CCDC170-202ENST00000537358 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
CCDC170-202ENST00000537358 IQCA1LA6NCM1 817 aa12.87□□□□□ -0.35
CCDC170-202ENST00000537358 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
CCDC170-202ENST00000537358 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
CCDC170-202ENST00000537358 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
CCDC170-202ENST00000537358 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
CCDC170-202ENST00000537358 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
CCDC170-202ENST00000537358 GPTP24298 496 aa12.86□□□□□ -0.35
CCDC170-202ENST00000537358 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC170-202ENST00000537358 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
CCDC170-202ENST00000537358 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
CCDC170-202ENST00000537358 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
CCDC170-202ENST00000537358 KLRG1Q96E93 195 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms