RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
POLR1B-216ENST00000537335 ZSCAN22P10073 491 aaPredicted RBP13.57□□□□□ -0.24
POLR1B-216ENST00000537335 RRP15Q9Y3B9 282 aaKnown RBP13.57□□□□□ -0.24
POLR1B-216ENST00000537335 CFAP58Q5T655 872 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
POLR1B-216ENST00000537335 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 GOLGA6CA6NDK9 693 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 GOLGA6DP0CG33 693 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 SLC8A1P32418 973 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 GBP1P32455 592 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 VAV2P52735 878 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 TYRO3Q06418 890 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 SETDB1Q15047 1291 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 GOLGA6AQ9NYA3 693 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 MXRA7P84157 204 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 CEP120Q8N960 986 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
POLR1B-216ENST00000537335 TDRD12Q587J7 1177 aaKnown RBP13.55□□□□□ -0.24
POLR1B-216ENST00000537335 TMEM57Q8N5G2 664 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 NEDD9Q14511 834 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 TRIM7Q9C029 511 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 MTHFSP49914 203 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
POLR1B-216ENST00000537335 STMN2Q93045 179 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 CABS1Q96KC9 395 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 ZBTB17Q13105 803 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 MAP7Q14244 749 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-216ENST00000537335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.55□□□□□ -0.24
POLR1B-216ENST00000537335 TBC1D31Q96DN5 1066 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-216ENST00000537335 SIL1Q9H173 461 aa13.55□□□□□ -0.24
POLR1B-216ENST00000537335 FYB1O15117 783 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 GJB2P29033 226 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
POLR1B-216ENST00000537335 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
POLR1B-216ENST00000537335 TMX3Q96JJ7 454 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
POLR1B-216ENST00000537335 LIG3P49916 1009 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 PFDN1O60925 122 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 ZBTB16Q05516 673 aa13.54□□□□□ -0.24
POLR1B-216ENST00000537335 ZMAT2Q96NC0 199 aaKnown RBP13.54□□□□□ -0.24
POLR1B-216ENST00000537335 E2F4Q16254 413 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 WASF1Q92558 559 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 GBP5Q96PP8 586 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 CNPY2Q9Y2B0 182 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 CYLC1P35663 651 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 SELENOSQ9BQE4 189 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 DACT1Q9NYF0 836 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 WIZO95785 1651 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 CARD6Q9BX69 1037 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 CCDC57Q2TAC2 916 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 AOPEPQ8N6M6 819 aa13.53□□□□□ -0.24
POLR1B-216ENST00000537335 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-216ENST00000537335 FAM160A1Q05DH4 1040 aa13.52□□□□□ -0.24
POLR1B-216ENST00000537335 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.24
POLR1B-216ENST00000537335 CCDC174Q6PII3 467 aa13.52□□□□□ -0.24
POLR1B-216ENST00000537335 SPATS2Q86XZ4 545 aaKnown RBP13.52□□□□□ -0.24
POLR1B-216ENST00000537335 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.24
POLR1B-216ENST00000537335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.24
POLR1B-216ENST00000537335 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.24
POLR1B-216ENST00000537335 RAD21O60216 631 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 RAB11FIP3O75154 756 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 IGHDP01880 384 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 MCTP2Q6DN12 878 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
POLR1B-216ENST00000537335 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.25
POLR1B-216ENST00000537335 HMOX1P09601 288 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
POLR1B-216ENST00000537335 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
POLR1B-216ENST00000537335 CETN3O15182 167 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 KIAA0753Q2KHM9 967 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 MRFAP1L1Q96HT8 127 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 BIRC2Q13490 618 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 UBAC1Q9BSL1 405 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms