RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDB1-208ENST00000537120 ADCY9O60503 1353 aa11.01□□□□□ -0.65
DDB1-208ENST00000537120 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
DDB1-208ENST00000537120 NBPF26B4DH59 902 aa11□□□□□ -0.65
DDB1-208ENST00000537120 C21orf2O43822 256 aa11□□□□□ -0.65
DDB1-208ENST00000537120 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 LMNB1P20700 586 aa11□□□□□ -0.65
DDB1-208ENST00000537120 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 IFFO2Q5TF58 517 aa11□□□□□ -0.65
DDB1-208ENST00000537120 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
DDB1-208ENST00000537120 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
DDB1-208ENST00000537120 NBPF15Q8N660 670 aa11□□□□□ -0.65
DDB1-208ENST00000537120 CNKSR1Q969H4 720 aa11□□□□□ -0.65
DDB1-208ENST00000537120 LAS1LQ9Y4W2 734 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 AFDNP55196 1824 aaKnown RBP11□□□□□ -0.65
DDB1-208ENST00000537120 KIF3CO14782 793 aa10.99□□□□□ -0.65
DDB1-208ENST00000537120 TOMM70O94826 608 aa10.99□□□□□ -0.65
DDB1-208ENST00000537120 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
DDB1-208ENST00000537120 RASSF7Q02833 373 aa10.99□□□□□ -0.65
DDB1-208ENST00000537120 RRAGCQ9HB90 399 aa10.99□□□□□ -0.65
DDB1-208ENST00000537120 NMRK2Q9NPI5 230 aa10.99□□□□□ -0.65
DDB1-208ENST00000537120 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 HSPA6P17066 643 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 HLFQ16534 295 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 STYK1Q6J9G0 422 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 MASTLQ96GX5 879 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
DDB1-208ENST00000537120 NPR1P16066 1061 aa10.97□□□□□ -0.65
DDB1-208ENST00000537120 RUNDC1Q96C34 613 aa10.97□□□□□ -0.65
DDB1-208ENST00000537120 NYXQ9GZU5 481 aa10.97□□□□□ -0.65
DDB1-208ENST00000537120 CEP350Q5VT06 3117 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 ERVV-1B6SEH8 477 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 SRGNP10124 158 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 GPTP24298 496 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 SOGA3Q5TF21 947 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
DDB1-208ENST00000537120 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.66
DDB1-208ENST00000537120 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
DDB1-208ENST00000537120 MAP3K15Q6ZN16 1313 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 RGL2O15211 777 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
DDB1-208ENST00000537120 ALDH1B1P30837 517 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
DDB1-208ENST00000537120 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 ADAMTS8Q9UP79 889 aa10.95□□□□□ -0.66
DDB1-208ENST00000537120 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
DDB1-208ENST00000537120 NFKBIEO00221 500 aa10.94□□□□□ -0.66
DDB1-208ENST00000537120 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
DDB1-208ENST00000537120 APLP1P51693 650 aa10.94□□□□□ -0.66
DDB1-208ENST00000537120 AIMP1Q12904 312 aaKnown RBP10.94□□□□□ -0.66
DDB1-208ENST00000537120 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
DDB1-208ENST00000537120 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
DDB1-208ENST00000537120 TAOK3Q9H2K8 898 aa10.94□□□□□ -0.66
DDB1-208ENST00000537120 NRXN2Q9P2S2 1712 aa10.94□□□□□ -0.66
DDB1-208ENST00000537120 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
DDB1-208ENST00000537120 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
DDB1-208ENST00000537120 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
DDB1-208ENST00000537120 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
DDB1-208ENST00000537120 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
DDB1-208ENST00000537120 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
DDB1-208ENST00000537120 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
DDB1-208ENST00000537120 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
DDB1-208ENST00000537120 SBF1O95248 1867 aa10.92□□□□□ -0.66
DDB1-208ENST00000537120 ANXA1P04083 346 aa10.92□□□□□ -0.66
DDB1-208ENST00000537120 FSTL1Q12841 308 aa10.92□□□□□ -0.66
DDB1-208ENST00000537120 SCN7AQ01118 1682 aa10.92□□□□□ -0.66
DDB1-208ENST00000537120 CCDC88AQ3V6T2 1871 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 CHL1O00533 1208 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 TCERG1O14776 1098 aaKnown RBP10.91□□□□□ -0.66
DDB1-208ENST00000537120 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 PRELPP51888 382 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 PARP10Q53GL7 1025 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 SUSD4Q5VX71 490 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
DDB1-208ENST00000537120 COPS6Q7L5N1 327 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 RTKN2Q8IZC4 609 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 SMC1BQ8NDV3 1235 aa10.91□□□□□ -0.66
DDB1-208ENST00000537120 RBM17Q96I25 401 aaKnown RBP10.91□□□□□ -0.66
DDB1-208ENST00000537120 ANKRD31Q8N7Z5 1873 aa10.9□□□□□ -0.66
DDB1-208ENST00000537120 KLRG2A4D1S0 409 aaPredicted RBP10.9□□□□□ -0.66
DDB1-208ENST00000537120 CALD1Q05682 793 aaKnown RBP10.9□□□□□ -0.66
DDB1-208ENST00000537120 HSP90AB3PQ58FF7 597 aa10.9□□□□□ -0.66
DDB1-208ENST00000537120 XAGE3Q8WTP9 111 aa10.9□□□□□ -0.66
DDB1-208ENST00000537120 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
DDB1-208ENST00000537120 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
DDB1-208ENST00000537120 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
DDB1-208ENST00000537120 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
DDB1-208ENST00000537120 APAF1O14727 1248 aa10.89□□□□□ -0.67
DDB1-208ENST00000537120 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDB1-208ENST00000537120 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
DDB1-208ENST00000537120 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
DDB1-208ENST00000537120 SYNE4Q8N205 404 aa10.89□□□□□ -0.67
DDB1-208ENST00000537120 DDX21Q9NR30 783 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDB1-208ENST00000537120 ZNF277Q9NRM2 450 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms