RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852	PRAMEF22	A3QJZ6	481 aa		13.87	□□□□□ -0.19
MAP3K4-208	ENST00000536852	IFIT2	P09913	472 aa	Known RBP	13.87	□□□□□ -0.19
MAP3K4-208	ENST00000536852	AK2	P54819	239 aa		13.87	□□□□□ -0.19
MAP3K4-208	ENST00000536852	RUFY2	Q8WXA3	655 aa		13.87	□□□□□ -0.19
MAP3K4-208	ENST00000536852	GDPD2	Q9HCC8	539 aa		13.87	□□□□□ -0.19
MAP3K4-208	ENST00000536852	ERC1	Q8IUD2	1116 aa		13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	GPATCH3	Q96I76	525 aa		13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	LARP6	Q9BRS8	491 aa	Known RBP	13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	LIMCH1	Q9UPQ0	1083 aa		13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	MSN	P26038	577 aa	Known RBP	13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	SYAP1	Q96A49	352 aa	Predicted RBP	13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	PDLIM2	Q96JY6	352 aa		13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	HYPK	Q9NX55	129 aa		13.86	□□□□□ -0.19
MAP3K4-208	ENST00000536852	RUFY3	Q7L099	469 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	OVOS2	A0A0G2JMS6	1433 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	CAST	P20810	708 aa	Known RBP	13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	HS1BP3	Q53T59	392 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	USP48	Q86UV5	1035 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	LINS1	Q8NG48	757 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	HEG1	Q9ULI3	1381 aa		13.85	□□□□□ -0.19
MAP3K4-208	ENST00000536852	GADD45B	O75293	160 aa	Predicted RBP	13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	PRKCSH	P14314	528 aa	Predicted RBP	13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	CPA1	P15085	419 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	AIMP1	Q12904	312 aa	Known RBP	13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	AACS	Q86V21	672 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	AXIN2	Q9Y2T1	843 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	GRM8	O00222	908 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	DDX58	O95786	925 aa	Known RBP	13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	PTH1R	Q03431	593 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	RNF214	Q8ND24	703 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	CRYBG1	Q9Y4K1	1723 aa		13.84	□□□□□ -0.19
MAP3K4-208	ENST00000536852	EVI5L	Q96CN4	794 aa		13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SUCLG2	Q96I99	432 aa		13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SMC3	Q9UQE7	1217 aa		13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZSCAN22	P10073	491 aa	Predicted RBP	13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	PRPF40B	Q6NWY9	871 aa	Known RBP	13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TSPY26P	Q9H489	355 aa		13.83	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SLIT3	O75094	1523 aa		13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	PHF14	O94880	888 aa		13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SYT1	P21579	422 aa		13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	JAKMIP1	Q96N16	626 aa	Known RBP	13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	BICC1	Q9H694	974 aa	Known RBP	13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	STX6	O43752	255 aa		13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	KAZALD1	Q96I82	304 aa		13.82	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SASH1	O94885	1247 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ADCK5	Q3MIX3	580 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	PDRG1	Q9NUG6	133 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CNPY2	Q9Y2B0	182 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	LARGE1	O95461	756 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	VPS53	Q5VIR6	699 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	KRT28	Q7Z3Y7	464 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	RIC3	Q7Z5B4	369 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	EAF2	Q96CJ1	260 aa	Predicted RBP	13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	NOL7	Q9UMY1	257 aa	Known RBP	13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CYP46A1	Q9Y6A2	500 aa		13.81	□□□□□ -0.2
MAP3K4-208	ENST00000536852	UTY	O14607	1347 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	PDIA6	Q15084	440 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CCDC83	Q8IWF9	413 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TMEM87A	Q8NBN3	555 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TM6SF1	Q9BZW5	370 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZSWIM6	Q9HCJ5	1215 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CCDC171	Q6TFL3	1326 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZKSCAN1	P17029	563 aa	Predicted RBP	13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	KCNJ4	P48050	445 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SLC39A6	Q13433	755 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	NECTIN1	Q15223	517 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SIL1	Q9H173	461 aa		13.8	□□□□□ -0.2
MAP3K4-208	ENST00000536852	F13A1	P00488	732 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZC3H6	P61129	1189 aa	Known RBP	13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	KCNB2	Q92953	911 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	FAM227B	Q96M60	508 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ATP6V1D	Q9Y5K8	247 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TCHH	Q07283	1943 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	HIP1	O00291	1037 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	IGKV5-2	P06315	115 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	MYL6B	P14649	208 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TPRN	Q4KMQ1	711 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZNF790	Q6PG37	636 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	LARP1	Q6PKG0	1096 aa	Known RBP	13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	DDX54	Q8TDD1	881 aa	Known RBP	13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	RAPGEF4	Q8WZA2	1011 aa		13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	RBM8A	Q9Y5S9	174 aa	Known RBP	13.79	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ERBB3	P21860	1342 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	OFD1	O75665	1012 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	GJB2	P29033	226 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	NEXN	Q0ZGT2	675 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	NMI	Q13287	307 aa	Predicted RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	TLR7	Q9NYK1	1049 aa	Known RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	NPHP4	O75161	1426 aa	Predicted RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	ZNF142	P52746	1687 aa	Predicted RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	DTNB	O60941	627 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CREB3L3	Q68CJ9	461 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms