RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 GPAT2Q6NUI2 795 aa10.13□□□□□ -0.79
YBX3-206ENST00000536823 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
YBX3-206ENST00000536823 AFF2P51816 1311 aa10.12□□□□□ -0.79
YBX3-206ENST00000536823 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
YBX3-206ENST00000536823 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
YBX3-206ENST00000536823 SIN3AQ96ST3 1273 aa10.12□□□□□ -0.79
YBX3-206ENST00000536823 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
YBX3-206ENST00000536823 ATP7BP35670 1465 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 SPATA31A3Q5VYP0 1347 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
YBX3-206ENST00000536823 KRT76Q01546 638 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 NBPF1Q3BBV0 1214 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 ZNF511Q8NB15 262 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 KLF16Q9BXK1 252 aaPredicted RBP10.11□□□□□ -0.79
YBX3-206ENST00000536823 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 TRPM1Q7Z4N2 1603 aa10.11□□□□□ -0.79
YBX3-206ENST00000536823 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
YBX3-206ENST00000536823 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
YBX3-206ENST00000536823 PTPRNQ16849 979 aa10.1□□□□□ -0.79
YBX3-206ENST00000536823 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
YBX3-206ENST00000536823 DNMT3AQ9Y6K1 912 aaPredicted RBP10.1□□□□□ -0.79
YBX3-206ENST00000536823 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
YBX3-206ENST00000536823 ADAMTS2O95450 1211 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 IGHA1P01876 353 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 EVA1BQ9NVM1 165 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 TRPM3Q9HCF6 1732 aaPredicted RBP10.09□□□□□ -0.79
YBX3-206ENST00000536823 MARF1Q9Y4F3 1742 aaKnown RBP10.09□□□□□ -0.79
YBX3-206ENST00000536823 ARHGEF10O15013 1369 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 CDK12Q9NYV4 1490 aaPredicted RBP10.09□□□□□ -0.79
YBX3-206ENST00000536823 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
YBX3-206ENST00000536823 C6orf229H3BNL8 230 aa10.08□□□□□ -0.8
YBX3-206ENST00000536823 PSME1Q06323 249 aa10.08□□□□□ -0.8
YBX3-206ENST00000536823 PMFBP1Q8TBY8 1022 aa10.08□□□□□ -0.8
YBX3-206ENST00000536823 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
YBX3-206ENST00000536823 QRICH2Q9H0J4 1663 aa10.08□□□□□ -0.8
YBX3-206ENST00000536823 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
YBX3-206ENST00000536823 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
YBX3-206ENST00000536823 ALS2Q96Q42 1657 aa10.07□□□□□ -0.8
YBX3-206ENST00000536823 GPRASP1Q5JY77 1395 aa10.07□□□□□ -0.8
YBX3-206ENST00000536823 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
YBX3-206ENST00000536823 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
YBX3-206ENST00000536823 NGLY1Q96IV0 654 aa10.07□□□□□ -0.8
YBX3-206ENST00000536823 ROCK2O75116 1388 aaKnown RBP10.06□□□□□ -0.8
YBX3-206ENST00000536823 UPP2O95045 317 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 BMP2P12643 396 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 RXRBP28702 533 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 IRS1P35568 1242 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 XP32Q5T750 250 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
YBX3-206ENST00000536823 SVOPQ8N4V2 548 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
YBX3-206ENST00000536823 ITPKCQ96DU7 683 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 ATRNO75882 1429 aa10.06□□□□□ -0.8
YBX3-206ENST00000536823 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.05□□□□□ -0.8
YBX3-206ENST00000536823 FDX1P10109 184 aa10.05□□□□□ -0.8
YBX3-206ENST00000536823 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
YBX3-206ENST00000536823 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
YBX3-206ENST00000536823 NGDNQ8NEJ9 315 aaKnown RBP10.05□□□□□ -0.8
YBX3-206ENST00000536823 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
YBX3-206ENST00000536823 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
YBX3-206ENST00000536823 CDK19Q9BWU1 502 aa10.05□□□□□ -0.8
YBX3-206ENST00000536823 QTRT2Q9H974 415 aaKnown RBP10.05□□□□□ -0.8
YBX3-206ENST00000536823 RGS12O14924 1447 aa10.05□□□□□ -0.8
YBX3-206ENST00000536823 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 POLR3AO14802 1390 aaPredicted RBP10.04□□□□□ -0.8
YBX3-206ENST00000536823 TONSLQ96HA7 1378 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 SLIT2O94813 1529 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 RBM6P78332 1123 aaKnown RBP10.04□□□□□ -0.8
YBX3-206ENST00000536823 MAP2K5Q13163 448 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 USP21Q9UK80 565 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
YBX3-206ENST00000536823 FOXK2Q01167 660 aa10.03□□□□□ -0.8
YBX3-206ENST00000536823 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
YBX3-206ENST00000536823 TRPC5Q9UL62 973 aaPredicted RBP10.03□□□□□ -0.8
YBX3-206ENST00000536823 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
YBX3-206ENST00000536823 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
YBX3-206ENST00000536823 EP400Q96L91 3159 aa10.03□□□□□ -0.8
YBX3-206ENST00000536823 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
YBX3-206ENST00000536823 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
YBX3-206ENST00000536823 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.81
YBX3-206ENST00000536823 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.81
YBX3-206ENST00000536823 PPIP5K1Q6PFW1 1433 aa10.01□□□□□ -0.81
YBX3-206ENST00000536823 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
YBX3-206ENST00000536823 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
YBX3-206ENST00000536823 ACEP12821 1306 aa10.01□□□□□ -0.81
YBX3-206ENST00000536823 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
YBX3-206ENST00000536823 KANK3Q6NY19 840 aa10□□□□□ -0.81
YBX3-206ENST00000536823 UNC5CLQ8IV45 518 aa10□□□□□ -0.81
YBX3-206ENST00000536823 MEIOBQ8N635 442 aa10□□□□□ -0.81
YBX3-206ENST00000536823 EVC2Q86UK5 1308 aa10□□□□□ -0.81
YBX3-206ENST00000536823 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms