RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFX4-204ENST00000536688 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
RFX4-204ENST00000536688 SUFUQ9UMX1 484 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 CD109Q6YHK3 1445 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
RFX4-204ENST00000536688 EIF3CLB5ME19 914 aaKnown RBP11.97□□□□□ -0.49
RFX4-204ENST00000536688 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
RFX4-204ENST00000536688 F13A1P00488 732 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 SKILP12757 684 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
RFX4-204ENST00000536688 TDO2P48775 406 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 EFCAB13Q8IY85 973 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 UBXN4Q92575 508 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 EIF3CQ99613 913 aaKnown RBP11.97□□□□□ -0.49
RFX4-204ENST00000536688 FAM107BQ9H098 131 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
RFX4-204ENST00000536688 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
RFX4-204ENST00000536688 STX6O43752 255 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 MAP2K2P36507 400 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.49
RFX4-204ENST00000536688 GSDMDP57764 484 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 LUZP1Q86V48 1076 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 HOMEZQ8IX15 550 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 ANKRD20A12PQ8NF67 263 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 NUP62CLQ9H1M0 184 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
RFX4-204ENST00000536688 FANCAO15360 1455 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
RFX4-204ENST00000536688 EFCAB8A8MWE9 144 aa11.96□□□□□ -0.5
RFX4-204ENST00000536688 KIF3CO14782 793 aa11.96□□□□□ -0.5
RFX4-204ENST00000536688 TBC1D8O95759 1140 aa11.96□□□□□ -0.5
RFX4-204ENST00000536688 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.5
RFX4-204ENST00000536688 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.5
RFX4-204ENST00000536688 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 USP27XA6NNY8 438 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 CCZ1BP86790 482 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 CCZ1P86791 482 aaPredicted RBP11.95□□□□□ -0.5
RFX4-204ENST00000536688 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 DDX19AQ9NUU7 478 aaKnown RBP11.95□□□□□ -0.5
RFX4-204ENST00000536688 PTPRTO14522 1441 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 PHLPP2Q6ZVD8 1323 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 CCDC189A1A4V9 331 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 PPP1R12AO14974 1030 aaPredicted RBP11.95□□□□□ -0.5
RFX4-204ENST00000536688 USP8P40818 1118 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 MTHFSP49914 203 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 SNW1Q13573 536 aaKnown RBP11.95□□□□□ -0.5
RFX4-204ENST00000536688 CCDC144BQ3MJ40 725 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
RFX4-204ENST00000536688 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 CCP110O43303 1012 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 KCNA4P22459 653 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 LMAN1P49257 510 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
RFX4-204ENST00000536688 ANO6Q4KMQ2 910 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 CC2D1AQ6P1N0 951 aaPredicted RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
RFX4-204ENST00000536688 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
RFX4-204ENST00000536688 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 TTC41PQ6P2S7 1318 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 SGSM2O43147 1006 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 FIBPO43427 364 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 TADA3O75528 432 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 SYT1P21579 422 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 EP400NLQ6ZTU2 488 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
RFX4-204ENST00000536688 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 ESYT1Q9BSJ8 1104 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 A1CFQ9NQ94 594 aaKnown RBP11.93□□□□□ -0.5
RFX4-204ENST00000536688 SAMD9LQ8IVG5 1584 aa11.93□□□□□ -0.5
RFX4-204ENST00000536688 A0A087WUV0 522 aaPredicted RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 MAP2K1Q02750 393 aaPredicted RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 ARFGAP3Q9NP61 516 aa11.92□□□□□ -0.5
RFX4-204ENST00000536688 TRPM2O94759 1503 aa11.92□□□□□ -0.5
RFX4-204ENST00000536688 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
RFX4-204ENST00000536688 ZNF165P49910 485 aa11.92□□□□□ -0.5
RFX4-204ENST00000536688 LRRFIP1Q32MZ4 808 aaKnown RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
RFX4-204ENST00000536688 ZC3H13Q5T200 1668 aaKnown RBP11.91□□□□□ -0.5
RFX4-204ENST00000536688 C21orf2O43822 256 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
RFX4-204ENST00000536688 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
RFX4-204ENST00000536688 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
RFX4-204ENST00000536688 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms