RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 LIG1P18858 919 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 PTH1RQ03431 593 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 NCBP1Q09161 790 aaKnown RBP17.26■□□□□ 0.35
CDH20-202ENST00000536675 CAMK4Q16566 473 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CDH20-202ENST00000536675 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 LRMPQ12912 555 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 CCDC186Q7Z3E2 898 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
CDH20-202ENST00000536675 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
CDH20-202ENST00000536675 ME3Q16798 604 aa17.25■□□□□ 0.35
CDH20-202ENST00000536675 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
CDH20-202ENST00000536675 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
CDH20-202ENST00000536675 CEP170BQ9Y4F5 1589 aaPredicted RBP17.25■□□□□ 0.35
CDH20-202ENST00000536675 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
CDH20-202ENST00000536675 ZSWIM6Q9HCJ5 1215 aa17.25■□□□□ 0.35
CDH20-202ENST00000536675 KDRP35968 1356 aa17.25■□□□□ 0.35
CDH20-202ENST00000536675 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
CDH20-202ENST00000536675 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 FEZ1Q99689 392 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 NRBP1Q9UHY1 535 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 IGSF3O75054 1194 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 C16orf45Q96MC5 204 aaPredicted RBP17.24■□□□□ 0.35
CDH20-202ENST00000536675 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
CDH20-202ENST00000536675 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 TECPR2O15040 1411 aa17.24■□□□□ 0.35
CDH20-202ENST00000536675 KRT85P78386 507 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 FAM173BQ6P4H8 233 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 EYA1Q99502 592 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 MAP3K5Q99683 1374 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
CDH20-202ENST00000536675 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 ANO6Q4KMQ2 910 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 CDC37L1Q7L3B6 337 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 TM6SF1Q9BZW5 370 aa17.23■□□□□ 0.35
CDH20-202ENST00000536675 USP6P35125 1406 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
CDH20-202ENST00000536675 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 KCNB2Q92953 911 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 TOPAZ1Q8N9V7 1692 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 OGFRQ9NZT2 677 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 ELP1O95163 1332 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 SYCP1Q15431 976 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 DACT1Q9NYF0 836 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 TPCN1Q9ULQ1 816 aa17.22■□□□□ 0.35
CDH20-202ENST00000536675 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
CDH20-202ENST00000536675 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
CDH20-202ENST00000536675 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
CDH20-202ENST00000536675 ZNF75DP51815 510 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 RUFY2Q8WXA3 655 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
CDH20-202ENST00000536675 TNNT1P13805 278 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
CDH20-202ENST00000536675 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
CDH20-202ENST00000536675 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
CDH20-202ENST00000536675 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
CDH20-202ENST00000536675 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
CDH20-202ENST00000536675 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
CDH20-202ENST00000536675 FLT4P35916 1363 aa17.2■□□□□ 0.34
CDH20-202ENST00000536675 NECTIN1Q15223 517 aa17.19■□□□□ 0.34
CDH20-202ENST00000536675 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
CDH20-202ENST00000536675 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
CDH20-202ENST00000536675 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CDH20-202ENST00000536675 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
CDH20-202ENST00000536675 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
CDH20-202ENST00000536675 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
CDH20-202ENST00000536675 CCDC171Q6TFL3 1326 aa17.18■□□□□ 0.34
CDH20-202ENST00000536675 A0A0U1RQG5 324 aaPredicted RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 TFIP11Q9UBB9 837 aaKnown RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 CACTINQ8WUQ7 758 aaKnown RBP17.18■□□□□ 0.34
CDH20-202ENST00000536675 PAXBP1Q9Y5B6 917 aa17.18■□□□□ 0.34
CDH20-202ENST00000536675 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
CDH20-202ENST00000536675 CREB3L3Q68CJ9 461 aa17.17■□□□□ 0.34
CDH20-202ENST00000536675 SPATA32Q96LK8 384 aa17.17■□□□□ 0.34
CDH20-202ENST00000536675 CLSTN2Q9H4D0 955 aa17.17■□□□□ 0.34
CDH20-202ENST00000536675 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
CDH20-202ENST00000536675 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
CDH20-202ENST00000536675 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
CDH20-202ENST00000536675 CCDC112Q8NEF3 446 aa17.17■□□□□ 0.34
CDH20-202ENST00000536675 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
CDH20-202ENST00000536675 AMPHP49418 695 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
CDH20-202ENST00000536675 CCDC144BQ3MJ40 725 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms