RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
KNTC1-209ENST00000536625 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 M0R082 166 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 PIK3CDO00329 1044 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 TATP17735 454 aaPredicted RBP8.34□□□□□ -1.07
KNTC1-209ENST00000536625 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 GRIK4Q16099 956 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 ZNF417Q8TAU3 575 aa8.34□□□□□ -1.07
KNTC1-209ENST00000536625 ZNF587Q96SQ5 575 aaPredicted RBP8.34□□□□□ -1.07
KNTC1-209ENST00000536625 CDK2AP1O14519 115 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 ALAS2P22557 587 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 TXLNAP40222 546 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 MTFR1Q15390 333 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 HDGFL1Q5TGJ6 251 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
KNTC1-209ENST00000536625 ALBP02768 609 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 LAMC2Q13753 1193 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 UCN2Q96RP3 112 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 CABP1Q9NZU7 370 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
KNTC1-209ENST00000536625 A6NJY4 79 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 SIN3BO75182 1162 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 NID1P14543 1247 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 SLC30A3Q99726 388 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
KNTC1-209ENST00000536625 NBPF11Q86T75 865 aa8.3□□□□□ -1.08
KNTC1-209ENST00000536625 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
KNTC1-209ENST00000536625 ZDHHC1Q8WTX9 485 aa8.3□□□□□ -1.08
KNTC1-209ENST00000536625 TRIM28Q13263 835 aaKnown RBP8.29□□□□□ -1.08
KNTC1-209ENST00000536625 BICDL1Q6ZP65 573 aa8.29□□□□□ -1.08
KNTC1-209ENST00000536625 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
KNTC1-209ENST00000536625 LRRC69Q6ZNQ3 347 aa8.28□□□□□ -1.08
KNTC1-209ENST00000536625 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
KNTC1-209ENST00000536625 GLMNQ92990 594 aa8.28□□□□□ -1.08
KNTC1-209ENST00000536625 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
KNTC1-209ENST00000536625 NACC1Q96RE7 527 aa8.28□□□□□ -1.08
KNTC1-209ENST00000536625 ZNF777Q9ULD5 760 aaPredicted RBP8.28□□□□□ -1.08
KNTC1-209ENST00000536625 LRP8Q14114 963 aa8.27□□□□□ -1.09
KNTC1-209ENST00000536625 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
KNTC1-209ENST00000536625 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
KNTC1-209ENST00000536625 C7orf43Q8WVR3 580 aa8.27□□□□□ -1.09
KNTC1-209ENST00000536625 HYAL3O43820 417 aaPredicted RBP8.26□□□□□ -1.09
KNTC1-209ENST00000536625 SELPP16109 830 aa8.26□□□□□ -1.09
KNTC1-209ENST00000536625 ADGRE1Q14246 886 aa8.26□□□□□ -1.09
KNTC1-209ENST00000536625 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
KNTC1-209ENST00000536625 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
KNTC1-209ENST00000536625 PCDHGA11Q9Y5H2 935 aa8.26□□□□□ -1.09
KNTC1-209ENST00000536625 H2AFB1P0C5Y9 115 aa8.25□□□□□ -1.09
KNTC1-209ENST00000536625 H2AFB2P0C5Z0 115 aa8.25□□□□□ -1.09
KNTC1-209ENST00000536625 SKIP12755 728 aa8.25□□□□□ -1.09
KNTC1-209ENST00000536625 ADH7P40394 386 aa8.25□□□□□ -1.09
KNTC1-209ENST00000536625 MBTPS1Q14703 1052 aa8.25□□□□□ -1.09
KNTC1-209ENST00000536625 EML1O00423 815 aa8.24□□□□□ -1.09
KNTC1-209ENST00000536625 L3MBTL2Q969R5 705 aa8.23□□□□□ -1.09
KNTC1-209ENST00000536625 SCHIP1Q9P0W5 487 aaPredicted RBP8.23□□□□□ -1.09
KNTC1-209ENST00000536625 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 C9orf172C9J069 976 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 ATP9BO43861 1147 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 SPEM2Q0P670 501 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 SH3PXD2AQ5TCZ1 1133 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
KNTC1-209ENST00000536625 CALR3Q96L12 384 aaKnown RBP8.22□□□□□ -1.09
KNTC1-209ENST00000536625 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 NOS2P35228 1153 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 NCOA4Q13772 614 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 TEAD4Q15561 434 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 DEPDC4Q8N2C3 294 aa8.21□□□□□ -1.1
KNTC1-209ENST00000536625 TFIP11Q9UBB9 837 aaKnown RBP8.21□□□□□ -1.1
KNTC1-209ENST00000536625 BTBD11A6QL63 1104 aa8.2□□□□□ -1.1
KNTC1-209ENST00000536625 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
KNTC1-209ENST00000536625 EPHA4P54764 986 aa8.2□□□□□ -1.1
KNTC1-209ENST00000536625 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
KNTC1-209ENST00000536625 PPP1R12CQ9BZL4 782 aa8.2□□□□□ -1.1
KNTC1-209ENST00000536625 ZNF358Q9NW07 568 aa8.2□□□□□ -1.1
KNTC1-209ENST00000536625 PALM3A6NDB9 673 aaPredicted RBP8.19□□□□□ -1.1
KNTC1-209ENST00000536625 ELNP15502 786 aa8.19□□□□□ -1.1
KNTC1-209ENST00000536625 TP53INP1Q96A56 240 aa8.19□□□□□ -1.1
KNTC1-209ENST00000536625 SSBP4Q9BWG4 385 aaPredicted RBP8.19□□□□□ -1.1
KNTC1-209ENST00000536625 GOLGA2P5Q9HBQ8 144 aa8.19□□□□□ -1.1
KNTC1-209ENST00000536625 MAFBQ9Y5Q3 323 aaPredicted RBP8.19□□□□□ -1.1
KNTC1-209ENST00000536625 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
KNTC1-209ENST00000536625 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
KNTC1-209ENST00000536625 ZBTB7BO15156 539 aaPredicted RBP8.18□□□□□ -1.1
KNTC1-209ENST00000536625 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
KNTC1-209ENST00000536625 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
KNTC1-209ENST00000536625 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
KNTC1-209ENST00000536625 LENG1Q96BZ8 264 aaPredicted RBP8.18□□□□□ -1.1
KNTC1-209ENST00000536625 LILRB5O75023 590 aa8.17□□□□□ -1.1
KNTC1-209ENST00000536625 EML3Q32P44 896 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms