RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-202ENST00000535997 SYAP1Q96A49 352 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-202ENST00000535997 DDX21Q9NR30 783 aaKnown RBP eCLIP19.33■□□□□ 0.68
CHMP1A-202ENST00000535997 UTYO14607 1347 aa19.33■□□□□ 0.68
CHMP1A-202ENST00000535997 PXDNQ92626 1479 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 CRYBG1Q9Y4K1 1723 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 SYCE3A1L190 88 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 EVI5LQ96CN4 794 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 AXIN2Q9Y2T1 843 aa19.32■□□□□ 0.68
CHMP1A-202ENST00000535997 GRM8O00222 908 aa19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 AK2P54819 239 aa19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 ZNF142P52746 1687 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 LMOD2Q6P5Q4 547 aa19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 LMTK3Q96Q04 1460 aa19.31■□□□□ 0.68
CHMP1A-202ENST00000535997 KCNB2Q92953 911 aa19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 TM6SF1Q9BZW5 370 aa19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 RUFY3Q7L099 469 aa19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 PA2G4Q9UQ80 394 aaKnown RBP19.3■□□□□ 0.68
CHMP1A-202ENST00000535997 HIP1O00291 1037 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 PDIA6Q15084 440 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 VPS53Q5VIR6 699 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 TMEM87AQ8NBN3 555 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 KAZALD1Q96I82 304 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 PHF14O94880 888 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 CASTP20810 708 aaKnown RBP19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 AACSQ86V21 672 aa19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
CHMP1A-202ENST00000535997 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 MSNP26038 577 aaKnown RBP19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 SUCLG2Q96I99 432 aa19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 SASH1O94885 1247 aa19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 PTH1RQ03431 593 aa19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 ZSWIM6Q9HCJ5 1215 aa19.27■□□□□ 0.68
CHMP1A-202ENST00000535997 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.67
CHMP1A-202ENST00000535997 STX6O43752 255 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 SYT1P21579 422 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 NECTIN1Q15223 517 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 BICC1Q9H694 974 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 NOL7Q9UMY1 257 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 SMC3Q9UQE7 1217 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 ATP6V1DQ9Y5K8 247 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 ERBB3P21860 1342 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 ZKSCAN1P17029 563 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 CYP46A1Q9Y6A2 500 aa19.26■□□□□ 0.67
CHMP1A-202ENST00000535997 ADAMTS7Q9UKP4 1686 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 EAF2Q96CJ1 260 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 PDRG1Q9NUG6 133 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 TCHHQ07283 1943 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 GADD45BO75293 160 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 FOXD4L6Q3SYB3 417 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 FOXD4L3Q6VB84 417 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 TSPY26PQ9H489 355 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 SNRKQ9NRH2 765 aa19.25■□□□□ 0.67
CHMP1A-202ENST00000535997 MST1RQ04912 1400 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 IGKV5-2P06315 115 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 MAP4K1Q92918 833 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 JAKMIP1Q96N16 626 aaKnown RBP19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 SLC52A2Q9HAB3 445 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 GDPD2Q9HCC8 539 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 CCDC171Q6TFL3 1326 aa19.24■□□□□ 0.67
CHMP1A-202ENST00000535997 ADCK5Q3MIX3 580 aa19.23■□□□□ 0.67
CHMP1A-202ENST00000535997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHMP1A-202ENST00000535997 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 PDIA4P13667 645 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 F13A1P00488 732 aa19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 CPA1P15085 419 aa19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
CHMP1A-202ENST00000535997 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 LETM1O95202 739 aaPredicted RBP19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 MCM5P33992 734 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 UBE2HP62256 183 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 GCKRQ14397 625 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 CCDC8Q9H0W5 538 aaPredicted RBP19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 PSMA5P28066 241 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms