RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 KIAA1024Q9UPX6 916 aa6.47□□□□□ -1.37
SPARCL1-208ENST00000535835 NOD1Q9Y239 953 aa6.47□□□□□ -1.37
SPARCL1-208ENST00000535835 POM121CA8CG34 1229 aa6.46□□□□□ -1.38
SPARCL1-208ENST00000535835 LZTS3O60299 673 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-208ENST00000535835 PCBP4P57723 403 aaKnown RBP6.46□□□□□ -1.38
SPARCL1-208ENST00000535835 DEPDC4Q8N2C3 294 aa6.46□□□□□ -1.38
SPARCL1-208ENST00000535835 L3MBTL2Q969R5 705 aa6.46□□□□□ -1.38
SPARCL1-208ENST00000535835 USP17L5A8MUK1 530 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 BACH1O14867 736 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 NOS2P35228 1153 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 LAMC2Q13753 1193 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 TBCELQ5QJ74 424 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 POTEAQ6S8J7 498 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 SLC9A9Q8IVB4 645 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 MARK1Q9P0L2 795 aa6.45□□□□□ -1.38
SPARCL1-208ENST00000535835 PRKCSHP14314 528 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 CLDN10P78369 228 aa6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 COL9A3Q14050 684 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
SPARCL1-208ENST00000535835 DKK1O94907 266 aa6.43□□□□□ -1.38
SPARCL1-208ENST00000535835 LRRC69Q6ZNQ3 347 aa6.43□□□□□ -1.38
SPARCL1-208ENST00000535835 SFSWAPQ12872 951 aaKnown RBP6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 RSPO4Q2I0M5 234 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 BICDL1Q6ZP65 573 aa6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 SYT9Q86SS6 491 aa6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 PLEKHM2Q8IWE5 1019 aa6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 SLC30A3Q99726 388 aa6.42□□□□□ -1.38
SPARCL1-208ENST00000535835 ELOA3CA0A087WX78 387 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 ELOA3DA6NLF2 546 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 HIRAP54198 1017 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 PSME1Q06323 249 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 ELOA3BQ3SY89 546 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 ELOA3Q8NG57 546 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 PRR12Q9ULL5 1215 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 GPC6Q9Y625 555 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 GJA3Q9Y6H8 435 aa6.41□□□□□ -1.38
SPARCL1-208ENST00000535835 SERTM1A2A2V5 107 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 USP17L3A6NCW0 530 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 USP17L4A6NCW7 530 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 NKAPLQ5M9Q1 402 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 USP17L2Q6R6M4 530 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 USP17L1Q7RTZ2 530 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 TPCN2Q8NHX9 752 aa6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
SPARCL1-208ENST00000535835 C21orf2O43822 256 aa6.39□□□□□ -1.39
SPARCL1-208ENST00000535835 SIN3BO75182 1162 aa6.39□□□□□ -1.39
SPARCL1-208ENST00000535835 CCDC102BQ68D86 513 aa6.39□□□□□ -1.39
SPARCL1-208ENST00000535835 TNFRSF25Q93038 417 aa6.39□□□□□ -1.39
SPARCL1-208ENST00000535835 ATP9BO43861 1147 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 HDGFL1Q5TGJ6 251 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 C1orf53Q5VUE5 145 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 ZNF232Q9UNY5 417 aa6.38□□□□□ -1.39
SPARCL1-208ENST00000535835 M0R2N6 131 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 DYRK3O43781 588 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 SPATA31C1P0DKV0 1188 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 KCNQ4P56696 695 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 PSMA6P60900 246 aaKnown RBP6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 SIX5Q8N196 739 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 OGFOD1Q8N543 542 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 PRDM6Q9NQX0 595 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 HCN4Q9Y3Q4 1203 aa6.37□□□□□ -1.39
SPARCL1-208ENST00000535835 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 ALBP02768 609 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 TYRO3Q06418 890 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 SPEM2Q0P670 501 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 C20orf204Q6ZNR8 217 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 RAB44Q7Z6P3 723 aaPredicted RBP6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 TSEN2Q8NCE0 465 aaKnown RBP6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 RHPN1Q8TCX5 695 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 PHACTR1Q9C0D0 580 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
SPARCL1-208ENST00000535835 M0R082 166 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 COBLO75128 1261 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 NID1P14543 1247 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 PRSS36Q5K4E3 855 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 SUSD3Q96L08 255 aa6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 MKRN1Q9UHC7 482 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-208ENST00000535835 PALM3A6NDB9 673 aaPredicted RBP6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 ALAS2P22557 587 aa6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 ADH7P40394 386 aa6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 ATP1A2P50993 1020 aa6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 LRP8Q14114 963 aa6.34□□□□□ -1.39
SPARCL1-208ENST00000535835 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms