RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 DICER1Q9UPY3 1922 aaKnown RBP27.37■■□□□ 1.97
LTBR-205ENST00000535739 NBPF26B4DH59 902 aa27.37■■□□□ 1.97
LTBR-205ENST00000535739 ST5P78524 1137 aa27.37■■□□□ 1.97
LTBR-205ENST00000535739 NBPF10Q6P3W6 841 aaKnown RBP27.37■■□□□ 1.97
LTBR-205ENST00000535739 NBPF15Q8N660 670 aa27.37■■□□□ 1.97
LTBR-205ENST00000535739 DNAJC5GQ8N7S2 189 aa27.37■■□□□ 1.97
LTBR-205ENST00000535739 GLTPD2A6NH11 291 aa27.36■■□□□ 1.97
LTBR-205ENST00000535739 FSTL1Q12841 308 aa27.36■■□□□ 1.97
LTBR-205ENST00000535739 CLEC4GQ6UXB4 293 aa27.35■■□□□ 1.97
LTBR-205ENST00000535739 LAMB4A4D0S4 1761 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 ARFGEF2Q9Y6D5 1785 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 NEFMP07197 916 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 SRGNP10124 158 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 HTRA3P83110 453 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 NBPF5PQ86XG9 351 aaPredicted RBP27.33■■□□□ 1.97
LTBR-205ENST00000535739 CNKSR1Q969H4 720 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 ZNF652Q9Y2D9 606 aa27.33■■□□□ 1.97
LTBR-205ENST00000535739 KDM3BQ7LBC6 1761 aa27.32■■□□□ 1.96
LTBR-205ENST00000535739 STYK1Q6J9G0 422 aa27.32■■□□□ 1.96
LTBR-205ENST00000535739 PLEKHF1Q96S99 279 aa27.32■■□□□ 1.96
LTBR-205ENST00000535739 MASTLQ96GX5 879 aa27.31■■□□□ 1.96
LTBR-205ENST00000535739 VEGFAP15692 232 aaPredicted RBP27.3■■□□□ 1.96
LTBR-205ENST00000535739 PRPF40BQ6NWY9 871 aaKnown RBP27.3■■□□□ 1.96
LTBR-205ENST00000535739 NIP7Q9Y221 180 aaKnown RBP eCLIP27.3■■□□□ 1.96
LTBR-205ENST00000535739 IFFO2Q5TF58 517 aa27.29■■□□□ 1.96
LTBR-205ENST00000535739 SMC1BQ8NDV3 1235 aa27.29■■□□□ 1.96
LTBR-205ENST00000535739 NFE2L2Q16236 605 aa27.28■■□□□ 1.96
LTBR-205ENST00000535739 HLFQ16534 295 aa27.28■■□□□ 1.96
LTBR-205ENST00000535739 ERFEQ4G0M1 354 aa27.28■■□□□ 1.96
LTBR-205ENST00000535739 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
LTBR-205ENST00000535739 TAOK3Q9H2K8 898 aa27.28■■□□□ 1.96
LTBR-205ENST00000535739 LTBP3Q9NS15 1303 aa27.27■■□□□ 1.96
LTBR-205ENST00000535739 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
LTBR-205ENST00000535739 PNISRQ8TF01 805 aaKnown RBP27.27■■□□□ 1.96
LTBR-205ENST00000535739 NUP98P52948 1817 aa27.26■■□□□ 1.95
LTBR-205ENST00000535739 RGL2O15211 777 aa27.26■■□□□ 1.95
LTBR-205ENST00000535739 DPY19L2Q6NUT2 758 aa27.26■■□□□ 1.95
LTBR-205ENST00000535739 TPTE2Q6XPS3 522 aa27.26■■□□□ 1.95
LTBR-205ENST00000535739 POTECB2RU33 542 aa27.25■■□□□ 1.95
LTBR-205ENST00000535739 NGEFQ8N5V2 710 aa27.25■■□□□ 1.95
LTBR-205ENST00000535739 PCNTO95613 3336 aa27.24■■□□□ 1.95
LTBR-205ENST00000535739 EIF4A1P60842 406 aaKnown RBP27.24■■□□□ 1.95
LTBR-205ENST00000535739 KLRG2A4D1S0 409 aaPredicted RBP27.23■■□□□ 1.95
LTBR-205ENST00000535739 NPR1P16066 1061 aa27.23■■□□□ 1.95
LTBR-205ENST00000535739 SOGA3Q5TF21 947 aa27.23■■□□□ 1.95
LTBR-205ENST00000535739 MAPK8IP3Q9UPT6 1336 aa27.22■■□□□ 1.95
LTBR-205ENST00000535739 C7orf43Q8WVR3 580 aa27.22■■□□□ 1.95
LTBR-205ENST00000535739 KLRG1Q96E93 195 aa27.22■■□□□ 1.95
LTBR-205ENST00000535739 RRP7AQ9Y3A4 280 aaKnown RBP27.22■■□□□ 1.95
LTBR-205ENST00000535739 PNNQ9H307 717 aaKnown RBP27.21■■□□□ 1.95
LTBR-205ENST00000535739 TTLL7Q6ZT98 887 aa27.19■■□□□ 1.94
LTBR-205ENST00000535739 DDNO94850 711 aaPredicted RBP27.18■■□□□ 1.94
LTBR-205ENST00000535739 MYL6BP14649 208 aa27.18■■□□□ 1.94
LTBR-205ENST00000535739 GTF2E1P29083 439 aaPredicted RBP27.18■■□□□ 1.94
LTBR-205ENST00000535739 CCDC93Q567U6 631 aa27.18■■□□□ 1.94
LTBR-205ENST00000535739 OLFM4Q6UX06 510 aa27.18■■□□□ 1.94
LTBR-205ENST00000535739 MAP3K15Q6ZN16 1313 aa27.17■■□□□ 1.94
LTBR-205ENST00000535739 ERVV-1B6SEH8 477 aa27.17■■□□□ 1.94
LTBR-205ENST00000535739 KIF6Q6ZMV9 814 aa27.16■■□□□ 1.94
LTBR-205ENST00000535739 ABCC12Q96J65 1359 aa27.15■■□□□ 1.94
LTBR-205ENST00000535739 NUTM1Q86Y26 1132 aa27.15■■□□□ 1.94
LTBR-205ENST00000535739 JMYQ8N9B5 988 aa27.15■■□□□ 1.94
LTBR-205ENST00000535739 FKBP4Q02790 459 aaKnown RBP eCLIP27.14■■□□□ 1.94
LTBR-205ENST00000535739 NYXQ9GZU5 481 aa27.14■■□□□ 1.94
LTBR-205ENST00000535739 ZBTB3Q9H5J0 574 aa27.14■■□□□ 1.94
LTBR-205ENST00000535739 TSPYL4Q9UJ04 414 aa27.14■■□□□ 1.94
LTBR-205ENST00000535739 GPTP24298 496 aa27.13■■□□□ 1.93
LTBR-205ENST00000535739 RIPK4P57078 832 aa27.13■■□□□ 1.93
LTBR-205ENST00000535739 RALBP1Q15311 655 aa27.13■■□□□ 1.93
LTBR-205ENST00000535739 ZNF277Q9NRM2 450 aaPredicted RBP27.13■■□□□ 1.93
LTBR-205ENST00000535739 ALDH1B1P30837 517 aa27.12■■□□□ 1.93
LTBR-205ENST00000535739 UBN2Q6ZU65 1347 aa27.12■■□□□ 1.93
LTBR-205ENST00000535739 POTEIP0CG38 1075 aa27.1■■□□□ 1.93
LTBR-205ENST00000535739 POTEJP0CG39 1038 aa27.1■■□□□ 1.93
LTBR-205ENST00000535739 CRY2Q49AN0 593 aa27.1■■□□□ 1.93
LTBR-205ENST00000535739 RTKN2Q8IZC4 609 aa27.1■■□□□ 1.93
LTBR-205ENST00000535739 SCN4AP35499 1836 aa27.09■■□□□ 1.93
LTBR-205ENST00000535739 SUSD4Q5VX71 490 aa27.09■■□□□ 1.93
LTBR-205ENST00000535739 ERBB4Q15303 1308 aa27.09■■□□□ 1.93
LTBR-205ENST00000535739 EIF2S2P20042 333 aaKnown RBP27.08■■□□□ 1.93
LTBR-205ENST00000535739 TMPOP42166 694 aaKnown RBP27.08■■□□□ 1.93
LTBR-205ENST00000535739 DDX10Q13206 875 aaKnown RBP27.08■■□□□ 1.93
LTBR-205ENST00000535739 CHADLQ6NUI6 762 aa27.08■■□□□ 1.93
LTBR-205ENST00000535739 ZNF34Q8IZ26 560 aa27.08■■□□□ 1.93
LTBR-205ENST00000535739 GIGYF2Q6Y7W6 1299 aaKnown RBP27.07■■□□□ 1.92
LTBR-205ENST00000535739 SYNE4Q8N205 404 aa27.07■■□□□ 1.92
LTBR-205ENST00000535739 ZNF541Q9H0D2 1346 aa27.07■■□□□ 1.92
LTBR-205ENST00000535739 IBTKQ9P2D0 1353 aaPredicted RBP27.07■■□□□ 1.92
LTBR-205ENST00000535739 PDIA6Q15084 440 aa27.06■■□□□ 1.92
LTBR-205ENST00000535739 LRP10Q7Z4F1 713 aa27.06■■□□□ 1.92
LTBR-205ENST00000535739 L3MBTL3Q96JM7 780 aaPredicted RBP27.06■■□□□ 1.92
LTBR-205ENST00000535739 ANXA1P04083 346 aa27.05■■□□□ 1.92
LTBR-205ENST00000535739 IARSP41252 1262 aaKnown RBP27.05■■□□□ 1.92
LTBR-205ENST00000535739 PROSER3Q2NL68 480 aa27.05■■□□□ 1.92
LTBR-205ENST00000535739 RPGRQ92834 1020 aaKnown RBP27.05■■□□□ 1.92
LTBR-205ENST00000535739 SNED1Q8TER0 1413 aa27.05■■□□□ 1.92
LTBR-205ENST00000535739 IQCA1LA6NCM1 817 aa27.04■■□□□ 1.92
LTBR-205ENST00000535739 NTSR2O95665 410 aa27.04■■□□□ 1.92
LTBR-205ENST00000535739 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
LTBR-205ENST00000535739 BABAM1Q9NWV8 329 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms