RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 FER1L6Q2WGJ9 1857 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 DICER1Q9UPY3 1922 aaKnown RBP11.51□□□□□ -0.57
CLIP1-206ENST00000535290 ECE1P42892 770 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 DGKZQ13574 1117 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 AMOTQ4VCS5 1084 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 CNKSR1Q969H4 720 aa11.51□□□□□ -0.57
CLIP1-206ENST00000535290 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-206ENST00000535290 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-206ENST00000535290 CANXP27824 592 aaKnown RBP11.5□□□□□ -0.57
CLIP1-206ENST00000535290 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
CLIP1-206ENST00000535290 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
CLIP1-206ENST00000535290 CST9Q5W186 159 aa11.5□□□□□ -0.57
CLIP1-206ENST00000535290 AEBP1Q8IUX7 1158 aa11.5□□□□□ -0.57
CLIP1-206ENST00000535290 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 SCN4AP35499 1836 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 SRGNP10124 158 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 MAP2K2P36507 400 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-206ENST00000535290 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
CLIP1-206ENST00000535290 TRAF5O00463 557 aa11.48□□□□□ -0.57
CLIP1-206ENST00000535290 EIF5P55010 431 aaKnown RBP11.48□□□□□ -0.57
CLIP1-206ENST00000535290 SOX10P56693 466 aa11.48□□□□□ -0.57
CLIP1-206ENST00000535290 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
CLIP1-206ENST00000535290 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
CLIP1-206ENST00000535290 MASTLQ96GX5 879 aa11.48□□□□□ -0.57
CLIP1-206ENST00000535290 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
CLIP1-206ENST00000535290 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-206ENST00000535290 SLX4Q8IY92 1834 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 FZD9O00144 591 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 CA12O43570 354 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLIP1-206ENST00000535290 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
CLIP1-206ENST00000535290 ANKRD31Q8N7Z5 1873 aa11.46□□□□□ -0.57
CLIP1-206ENST00000535290 GPC2Q8N158 579 aa11.46□□□□□ -0.57
CLIP1-206ENST00000535290 CNBD1Q8NA66 436 aa11.46□□□□□ -0.57
CLIP1-206ENST00000535290 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
CLIP1-206ENST00000535290 CASP8AP2Q9UKL3 1982 aa11.46□□□□□ -0.58
CLIP1-206ENST00000535290 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.58
CLIP1-206ENST00000535290 LTBP1Q14766 1721 aa11.46□□□□□ -0.58
CLIP1-206ENST00000535290 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-206ENST00000535290 A0A087WZG4 1122 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 NPHP1O15259 732 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 EPS15P42566 896 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 CIAPIN1Q6FI81 312 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 SAPCD2Q86UD0 394 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 ZIC5Q96T25 663 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 SETDB2Q96T68 719 aa11.44□□□□□ -0.58
CLIP1-206ENST00000535290 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
CLIP1-206ENST00000535290 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-206ENST00000535290 ST5P78524 1137 aa11.43□□□□□ -0.58
CLIP1-206ENST00000535290 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
CLIP1-206ENST00000535290 SYNE4Q8N205 404 aa11.43□□□□□ -0.58
CLIP1-206ENST00000535290 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-206ENST00000535290 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
CLIP1-206ENST00000535290 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
CLIP1-206ENST00000535290 STARD3NLO95772 234 aa11.42□□□□□ -0.58
CLIP1-206ENST00000535290 SCNN1DP51172 638 aa11.42□□□□□ -0.58
CLIP1-206ENST00000535290 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
CLIP1-206ENST00000535290 AKAP4Q5JQC9 854 aa11.42□□□□□ -0.58
CLIP1-206ENST00000535290 RTKN2Q8IZC4 609 aa11.42□□□□□ -0.58
CLIP1-206ENST00000535290 CAMTA2O94983 1202 aa11.41□□□□□ -0.58
CLIP1-206ENST00000535290 CELF2O95319 508 aaKnown RBP11.41□□□□□ -0.58
CLIP1-206ENST00000535290 NPR1P16066 1061 aa11.41□□□□□ -0.58
CLIP1-206ENST00000535290 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-206ENST00000535290 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-206ENST00000535290 USP50Q70EL3 339 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-206ENST00000535290 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
CLIP1-206ENST00000535290 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-206ENST00000535290 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
CLIP1-206ENST00000535290 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
CLIP1-206ENST00000535290 A1BGP04217 495 aa11.38□□□□□ -0.59
CLIP1-206ENST00000535290 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-206ENST00000535290 NBPF5PQ86XG9 351 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-206ENST00000535290 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-206ENST00000535290 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-206ENST00000535290 COL4A5P29400 1685 aa11.38□□□□□ -0.59
CLIP1-206ENST00000535290 CACNA1SQ13698 1873 aa11.38□□□□□ -0.59
CLIP1-206ENST00000535290 MRC1P22897 1456 aa11.38□□□□□ -0.59
CLIP1-206ENST00000535290 PSMD1Q99460 953 aa11.37□□□□□ -0.59
CLIP1-206ENST00000535290 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 IL13P35225 146 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 NOGQ13253 232 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 TTC5Q8N0Z6 440 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 ZNF408Q9H9D4 720 aa11.36□□□□□ -0.59
CLIP1-206ENST00000535290 HABP4Q5JVS0 413 aaKnown RBP11.35□□□□□ -0.59
CLIP1-206ENST00000535290 SLC51AQ86UW1 340 aa11.35□□□□□ -0.59
CLIP1-206ENST00000535290 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
CLIP1-206ENST00000535290 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
CLIP1-206ENST00000535290 ADARB2Q9NS39 739 aaKnown RBP11.35□□□□□ -0.59
CLIP1-206ENST00000535290 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 SCN7AQ01118 1682 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms