RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
UPK2-202ENST00000534788 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
UPK2-202ENST00000534788 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
UPK2-202ENST00000534788 PRDM10Q9NQV6 1147 aa17.98■□□□□ 0.47
UPK2-202ENST00000534788 COL3A1P02461 1466 aaPredicted RBP17.97■□□□□ 0.47
UPK2-202ENST00000534788 IQCA1LA6NCM1 817 aa17.97■□□□□ 0.47
UPK2-202ENST00000534788 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
UPK2-202ENST00000534788 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
UPK2-202ENST00000534788 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
UPK2-202ENST00000534788 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
UPK2-202ENST00000534788 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
UPK2-202ENST00000534788 A1BGP04217 495 aa17.96■□□□□ 0.47
UPK2-202ENST00000534788 ST5P78524 1137 aa17.96■□□□□ 0.47
UPK2-202ENST00000534788 SOGA3Q5TF21 947 aa17.96■□□□□ 0.47
UPK2-202ENST00000534788 MASTLQ96GX5 879 aa17.96■□□□□ 0.47
UPK2-202ENST00000534788 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
UPK2-202ENST00000534788 TEFQ10587 303 aa17.95■□□□□ 0.46
UPK2-202ENST00000534788 C7orf43Q8WVR3 580 aa17.95■□□□□ 0.46
UPK2-202ENST00000534788 TMEM88BA6NKF7 163 aa17.94■□□□□ 0.46
UPK2-202ENST00000534788 NPHP1O15259 732 aa17.94■□□□□ 0.46
UPK2-202ENST00000534788 VEGFBP49765 207 aa17.94■□□□□ 0.46
UPK2-202ENST00000534788 ZNF541Q9H0D2 1346 aa17.94■□□□□ 0.46
UPK2-202ENST00000534788 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
UPK2-202ENST00000534788 CTCFP49711 727 aaPredicted RBP17.93■□□□□ 0.46
UPK2-202ENST00000534788 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
UPK2-202ENST00000534788 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
UPK2-202ENST00000534788 CCDC93Q567U6 631 aa17.92■□□□□ 0.46
UPK2-202ENST00000534788 DZIP3Q86Y13 1208 aaKnown RBP17.92■□□□□ 0.46
UPK2-202ENST00000534788 AIDAQ96BJ3 306 aa17.92■□□□□ 0.46
UPK2-202ENST00000534788 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
UPK2-202ENST00000534788 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
UPK2-202ENST00000534788 KCNQ3O43525 872 aa17.91■□□□□ 0.46
UPK2-202ENST00000534788 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
UPK2-202ENST00000534788 GAS2L2Q8NHY3 880 aa17.91■□□□□ 0.46
UPK2-202ENST00000534788 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
UPK2-202ENST00000534788 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
UPK2-202ENST00000534788 LBX1P52954 281 aa17.9■□□□□ 0.46
UPK2-202ENST00000534788 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
UPK2-202ENST00000534788 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
UPK2-202ENST00000534788 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
UPK2-202ENST00000534788 NPR1P16066 1061 aa17.89■□□□□ 0.45
UPK2-202ENST00000534788 EPHX2P34913 555 aa17.89■□□□□ 0.45
UPK2-202ENST00000534788 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
UPK2-202ENST00000534788 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
UPK2-202ENST00000534788 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
UPK2-202ENST00000534788 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
UPK2-202ENST00000534788 KLRG2A4D1S0 409 aaPredicted RBP17.88■□□□□ 0.45
UPK2-202ENST00000534788 RASSF10A6NK89 507 aa17.88■□□□□ 0.45
UPK2-202ENST00000534788 CLEC4GQ6UXB4 293 aa17.88■□□□□ 0.45
UPK2-202ENST00000534788 LTBP1Q14766 1721 aa17.88■□□□□ 0.45
UPK2-202ENST00000534788 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
UPK2-202ENST00000534788 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
UPK2-202ENST00000534788 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
UPK2-202ENST00000534788 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
UPK2-202ENST00000534788 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
UPK2-202ENST00000534788 HSPA8P11142 646 aaKnown RBP17.87■□□□□ 0.45
UPK2-202ENST00000534788 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
UPK2-202ENST00000534788 FZD9O00144 591 aa17.86■□□□□ 0.45
UPK2-202ENST00000534788 DEFB115Q30KQ5 88 aa17.86■□□□□ 0.45
UPK2-202ENST00000534788 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
UPK2-202ENST00000534788 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
UPK2-202ENST00000534788 COL4A5P29400 1685 aa17.86■□□□□ 0.45
UPK2-202ENST00000534788 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
UPK2-202ENST00000534788 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
UPK2-202ENST00000534788 RALBP1Q15311 655 aa17.85■□□□□ 0.45
UPK2-202ENST00000534788 PNMA8AQ86V59 439 aaPredicted RBP17.85■□□□□ 0.45
UPK2-202ENST00000534788 RTKN2Q8IZC4 609 aa17.85■□□□□ 0.45
UPK2-202ENST00000534788 CNTROBQ8N137 903 aa17.85■□□□□ 0.45
UPK2-202ENST00000534788 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
UPK2-202ENST00000534788 WDR33Q9C0J8 1336 aaKnown RBP17.84■□□□□ 0.45
UPK2-202ENST00000534788 SLC34A2O95436 690 aa17.84■□□□□ 0.45
UPK2-202ENST00000534788 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
UPK2-202ENST00000534788 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
UPK2-202ENST00000534788 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
UPK2-202ENST00000534788 PHACTR3Q96KR7 559 aa17.84■□□□□ 0.45
UPK2-202ENST00000534788 TRPM7Q96QT4 1865 aa17.84■□□□□ 0.45
UPK2-202ENST00000534788 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
UPK2-202ENST00000534788 GPC2Q8N158 579 aa17.83■□□□□ 0.44
UPK2-202ENST00000534788 SYNE4Q8N205 404 aa17.83■□□□□ 0.44
UPK2-202ENST00000534788 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
UPK2-202ENST00000534788 NUP98P52948 1817 aa17.82■□□□□ 0.44
UPK2-202ENST00000534788 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
UPK2-202ENST00000534788 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
UPK2-202ENST00000534788 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
UPK2-202ENST00000534788 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
UPK2-202ENST00000534788 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
UPK2-202ENST00000534788 RGL2O15211 777 aa17.81■□□□□ 0.44
UPK2-202ENST00000534788 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
UPK2-202ENST00000534788 MAP2K1Q02750 393 aaPredicted RBP17.81■□□□□ 0.44
UPK2-202ENST00000534788 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
UPK2-202ENST00000534788 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
UPK2-202ENST00000534788 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
UPK2-202ENST00000534788 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
UPK2-202ENST00000534788 PSMD1Q99460 953 aa17.8■□□□□ 0.44
UPK2-202ENST00000534788 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
UPK2-202ENST00000534788 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
UPK2-202ENST00000534788 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
UPK2-202ENST00000534788 FMR1Q06787 632 aaKnown RBP eCLIP17.79■□□□□ 0.44
UPK2-202ENST00000534788 HLFQ16534 295 aa17.79■□□□□ 0.44
UPK2-202ENST00000534788 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms