RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 NEURL4Q96JN8 1562 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 DACT1Q9NYF0 836 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 PIK3C2BO00750 1634 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 ALKQ9UM73 1620 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 RAD50Q92878 1312 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 RGS12O14924 1447 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 MAP3K11Q16584 847 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 DNAAF4Q8WXU2 420 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 LRRC2Q9BYS8 371 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 CDK12Q9NYV4 1490 aaPredicted RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 KCNQ3O43525 872 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 LRMPQ12912 555 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 G3BP1Q13283 466 aaKnown RBP eCLIP8.14□□□□□ -1.11
RAG1-203ENST00000534663 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 NDUFB9Q9Y6M9 179 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 SIGLEC1Q9BZZ2 1709 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 RIOK3O14730 519 aaKnown RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 GLRX3O76003 335 aaKnown RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 TPD52L1Q16890 204 aaPredicted RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 UVSSAQ2YD98 709 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 KLHDC4Q8TBB5 520 aa8.14□□□□□ -1.11
RAG1-203ENST00000534663 CCDC94Q9BW85 323 aaPredicted RBP8.14□□□□□ -1.11
RAG1-203ENST00000534663 AATKQ6ZMQ8 1374 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 ATP7BP35670 1465 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 MYO5BQ9ULV0 1848 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 LIG1P18858 919 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.11
RAG1-203ENST00000534663 ANO6Q4KMQ2 910 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 BLOC1S2Q6QNY1 142 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 FILIP1Q7Z7B0 1213 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 BCL2L12Q9HB09 334 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.13□□□□□ -1.11
RAG1-203ENST00000534663 RBM8AQ9Y5S9 174 aaKnown RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 V9GYY5 206 aaPredicted RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 GOLGA6L19H0YKK7 550 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 ME3Q16798 604 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 PRIMPOLQ96LW4 560 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 A0A087WWV3 80 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 BECN2A8MW95 431 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 HSP90AB4PQ58FF6 505 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 EDC3Q96F86 508 aaKnown RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 LSG1Q9H089 658 aaKnown RBP8.13□□□□□ -1.11
RAG1-203ENST00000534663 ECHDC1Q9NTX5 307 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 NRBP1Q9UHY1 535 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 MTMR6Q9Y217 621 aa8.13□□□□□ -1.11
RAG1-203ENST00000534663 ZRSR1Q15695 479 aaKnown RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 MYL6BP14649 208 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 GUCY1B3Q02153 619 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 TYRO3Q06418 890 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 TTC6Q86TZ1 520 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 PI4K2BQ8TCG2 481 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 SSH3Q8TE77 659 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 TRMT1Q9NXH9 659 aaKnown RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 STAP2Q9UGK3 403 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 AMOTL2Q9Y2J4 779 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 MAP3K2Q9Y2U5 619 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 PIP4K2AP48426 406 aaPredicted RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 ZNF530Q6P9A1 599 aaPredicted RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 ERCC4Q92889 916 aaPredicted RBP8.12□□□□□ -1.11
RAG1-203ENST00000534663 HYPKQ9NX55 129 aa8.12□□□□□ -1.11
RAG1-203ENST00000534663 RPAP1Q9BWH6 1393 aaPredicted RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 AP5Z1O43299 807 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 ZNF165P49910 485 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 NMIQ13287 307 aaPredicted RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 EID1Q9Y6B2 187 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 TNNT1P13805 278 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 ROBO2Q9HCK4 1378 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 ATP2B3Q16720 1220 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
RAG1-203ENST00000534663 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 ZSCAN31Q96LW9 406 aaPredicted RBP8.11□□□□□ -1.11
RAG1-203ENST00000534663 FLT4P35916 1363 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 PSMA5P28066 241 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 CLIP2Q9UDT6 1046 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 CRB1P82279 1406 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 SALL3Q9BXA9 1300 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 JAK2O60674 1132 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 PDCP20941 246 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 C1orf141Q5JVX7 400 aa8.1□□□□□ -1.11
RAG1-203ENST00000534663 ZNF710Q8N1W2 664 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms