RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 TSPYL4Q9UJ04 414 aa6.68□□□□□ -1.34
USH1C-210ENST00000534556 ZNF330Q9Y3S2 320 aaPredicted RBP6.68□□□□□ -1.34
USH1C-210ENST00000534556 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
USH1C-210ENST00000534556 SPEF2Q9C093 1822 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 MYL6BP14649 208 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 PRELPP51888 382 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 PRR5LQ6MZQ0 368 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 NGEFQ8N5V2 710 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 NECTIN2Q92692 538 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 PNNQ9H307 717 aaKnown RBP6.67□□□□□ -1.34
USH1C-210ENST00000534556 MYH3P11055 1940 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 ADCY9O60503 1353 aa6.67□□□□□ -1.34
USH1C-210ENST00000534556 TGFB2P61812 414 aa6.66□□□□□ -1.34
USH1C-210ENST00000534556 C8orf58Q8NAV2 365 aa6.66□□□□□ -1.34
USH1C-210ENST00000534556 ZNF784Q8NCA9 323 aaPredicted RBP6.66□□□□□ -1.34
USH1C-210ENST00000534556 SPINK5Q9NQ38 1064 aaPredicted RBP6.66□□□□□ -1.34
USH1C-210ENST00000534556 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
USH1C-210ENST00000534556 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
USH1C-210ENST00000534556 UBN2Q6ZU65 1347 aa6.66□□□□□ -1.34
USH1C-210ENST00000534556 A0A087WZG4 1122 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 NEFMP07197 916 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 EIF2S2P20042 333 aaKnown RBP6.65□□□□□ -1.34
USH1C-210ENST00000534556 SYNE4Q8N205 404 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 TSPYL6Q8N831 410 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 ZNF428Q96B54 188 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 CFAP44Q96MT7 982 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
USH1C-210ENST00000534556 ABCC12Q96J65 1359 aa6.65□□□□□ -1.35
USH1C-210ENST00000534556 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 ANP32CO43423 234 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 C3orf67Q6ZVT6 689 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 WWC1Q8IX03 1113 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 ZNF34Q8IZ26 560 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
USH1C-210ENST00000534556 ZBTB3Q9H5J0 574 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 CHPF2Q9P2E5 772 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 MAP3K15Q6ZN16 1313 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 ATP10DQ9P241 1426 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 PCNTO95613 3336 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 A0A1B0GUL6 1792 aa6.64□□□□□ -1.35
USH1C-210ENST00000534556 LRRC37AA6NMS7 1700 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 ELL2O00472 640 aaPredicted RBP6.63□□□□□ -1.35
USH1C-210ENST00000534556 GPTP24298 496 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 COL4A5P29400 1685 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 RASSF7Q02833 373 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 LMOD3Q0VAK6 560 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 SUSD4Q5VX71 490 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 DUSP27Q5VZP5 1158 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 OLFM4Q6UX06 510 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 CLEC4GQ6UXB4 293 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 NUTM1Q86Y26 1132 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 C2CD5Q86YS7 1000 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 XAGE3Q8WTP9 111 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 SETDB2Q96T68 719 aa6.63□□□□□ -1.35
USH1C-210ENST00000534556 NIP7Q9Y221 180 aaKnown RBP eCLIP6.63□□□□□ -1.35
USH1C-210ENST00000534556 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
USH1C-210ENST00000534556 ZNF646O15015 1829 aaPredicted RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 LTBP1Q14766 1721 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 ERBB4Q15303 1308 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 KLRG2A4D1S0 409 aaPredicted RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 ERVV-1B6SEH8 477 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 NFKBIEO00221 500 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 TCERG1O14776 1098 aaKnown RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 GRIN3BO60391 1043 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 NTSR2O95665 410 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 SRGNP10124 158 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 AIMP1Q12904 312 aaKnown RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 CCDC27Q2M243 656 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 ERFEQ4G0M1 354 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 GIGYF2Q6Y7W6 1299 aaKnown RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 ARHGAP27Q6ZUM4 889 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 FAM9BQ8IZU0 186 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 C7orf43Q8WVR3 580 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 BRIP1Q9BX63 1249 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 PHAXQ9H814 394 aaKnown RBP6.62□□□□□ -1.35
USH1C-210ENST00000534556 DDX21Q9NR30 783 aaKnown RBP eCLIP6.62□□□□□ -1.35
USH1C-210ENST00000534556 IFT57Q9NWB7 429 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
USH1C-210ENST00000534556 ZNF521Q96K83 1311 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 POLR2AP24928 1970 aaKnown RBP6.61□□□□□ -1.35
USH1C-210ENST00000534556 DCAF8L1A6NGE4 600 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 RGL2O15211 777 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 GNAI1P63096 354 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 DALRD3Q5D0E6 543 aaKnown RBP6.61□□□□□ -1.35
USH1C-210ENST00000534556 HDGFL1Q5TGJ6 251 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 G2E3Q7L622 706 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 NBPF5PQ86XG9 351 aaPredicted RBP6.61□□□□□ -1.35
USH1C-210ENST00000534556 CNBD1Q8NA66 436 aa6.61□□□□□ -1.35
USH1C-210ENST00000534556 ZNF219Q9P2Y4 722 aaPredicted RBP6.61□□□□□ -1.35
USH1C-210ENST00000534556 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 RIC1Q4ADV7 1423 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 H0YIN7 160 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 C21orf2O43822 256 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 HOXB7P09629 217 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
USH1C-210ENST00000534556 TTLL6Q8N841 843 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms