RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 BCL9O00512 1426 aa16.46■□□□□ 0.23
BEST1-208ENST00000534553 SPATA31A1Q5TZJ5 1347 aa16.46■□□□□ 0.23
BEST1-208ENST00000534553 REC8O95072 547 aa16.45■□□□□ 0.22
BEST1-208ENST00000534553 STARD3NLO95772 234 aa16.45■□□□□ 0.22
BEST1-208ENST00000534553 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
BEST1-208ENST00000534553 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
BEST1-208ENST00000534553 PIGBQ92521 554 aa16.45■□□□□ 0.22
BEST1-208ENST00000534553 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
BEST1-208ENST00000534553 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
BEST1-208ENST00000534553 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
BEST1-208ENST00000534553 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
BEST1-208ENST00000534553 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
BEST1-208ENST00000534553 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
BEST1-208ENST00000534553 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
BEST1-208ENST00000534553 TTC41PQ6P2S7 1318 aa16.44■□□□□ 0.22
BEST1-208ENST00000534553 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
BEST1-208ENST00000534553 SLIT2O94813 1529 aa16.44■□□□□ 0.22
BEST1-208ENST00000534553 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
BEST1-208ENST00000534553 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
BEST1-208ENST00000534553 MYT1Q01538 1121 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 DDB1Q16531 1140 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
BEST1-208ENST00000534553 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 SNX21Q969T3 373 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
BEST1-208ENST00000534553 ERC2O15083 957 aa16.41■□□□□ 0.22
BEST1-208ENST00000534553 G3BP1Q13283 466 aaKnown RBP eCLIP16.41■□□□□ 0.22
BEST1-208ENST00000534553 CWC25Q9NXE8 425 aaPredicted RBP16.41■□□□□ 0.22
BEST1-208ENST00000534553 ITGB4P16144 1822 aa16.41■□□□□ 0.22
BEST1-208ENST00000534553 JCADQ9P266 1359 aa16.41■□□□□ 0.22
BEST1-208ENST00000534553 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
BEST1-208ENST00000534553 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 A0A087WZG4 1122 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
BEST1-208ENST00000534553 A1BGP04217 495 aa16.4■□□□□ 0.22
BEST1-208ENST00000534553 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.22
BEST1-208ENST00000534553 TUBGCP6Q96RT7 1819 aa16.39■□□□□ 0.22
BEST1-208ENST00000534553 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
BEST1-208ENST00000534553 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
BEST1-208ENST00000534553 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
BEST1-208ENST00000534553 ASAP1Q9ULH1 1129 aa16.39■□□□□ 0.21
BEST1-208ENST00000534553 H7C1W4 665 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
BEST1-208ENST00000534553 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
BEST1-208ENST00000534553 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
BEST1-208ENST00000534553 UBE3BQ7Z3V4 1068 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
BEST1-208ENST00000534553 CASP7P55210 303 aa16.37■□□□□ 0.21
BEST1-208ENST00000534553 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
BEST1-208ENST00000534553 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
BEST1-208ENST00000534553 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
BEST1-208ENST00000534553 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
BEST1-208ENST00000534553 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
BEST1-208ENST00000534553 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
BEST1-208ENST00000534553 RABEP1Q15276 862 aa16.36■□□□□ 0.21
BEST1-208ENST00000534553 NUTM1Q86Y26 1132 aa16.36■□□□□ 0.21
BEST1-208ENST00000534553 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
BEST1-208ENST00000534553 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
BEST1-208ENST00000534553 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
BEST1-208ENST00000534553 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
BEST1-208ENST00000534553 ATP5J2-PTCD1G3V325 749 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
BEST1-208ENST00000534553 RILPL2Q969X0 211 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 MCCP23508 829 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 CHMLP26374 656 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
BEST1-208ENST00000534553 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
BEST1-208ENST00000534553 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
BEST1-208ENST00000534553 KIF2CQ99661 725 aa16.34■□□□□ 0.21
BEST1-208ENST00000534553 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
BEST1-208ENST00000534553 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
BEST1-208ENST00000534553 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
BEST1-208ENST00000534553 SASH1O94885 1247 aa16.33■□□□□ 0.21
BEST1-208ENST00000534553 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.21
BEST1-208ENST00000534553 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.21
BEST1-208ENST00000534553 VPS72Q15906 364 aa16.33■□□□□ 0.21
BEST1-208ENST00000534553 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.21
BEST1-208ENST00000534553 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.21
BEST1-208ENST00000534553 RFX5P48382 616 aaPredicted RBP16.33■□□□□ 0.2
BEST1-208ENST00000534553 PTPN12Q05209 780 aaKnown RBP16.33■□□□□ 0.2
BEST1-208ENST00000534553 EPHA10Q5JZY3 1008 aa16.33■□□□□ 0.2
BEST1-208ENST00000534553 AACSQ86V21 672 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms