RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
TTC17-215ENST00000534417 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
TTC17-215ENST00000534417 NUP188Q5SRE5 1749 aa12.78□□□□□ -0.36
TTC17-215ENST00000534417 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
TTC17-215ENST00000534417 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
TTC17-215ENST00000534417 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
TTC17-215ENST00000534417 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 RILPL2Q969X0 211 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
TTC17-215ENST00000534417 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 NEK4P51957 841 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
TTC17-215ENST00000534417 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 KAZALD1Q96I82 304 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
TTC17-215ENST00000534417 ANO2Q9NQ90 1003 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
TTC17-215ENST00000534417 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
TTC17-215ENST00000534417 ANXA1P04083 346 aa12.75□□□□□ -0.37
TTC17-215ENST00000534417 RFX7Q2KHR2 1363 aa12.75□□□□□ -0.37
TTC17-215ENST00000534417 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
TTC17-215ENST00000534417 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
TTC17-215ENST00000534417 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
TTC17-215ENST00000534417 TJP1Q07157 1748 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 JCADQ9P266 1359 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 BRD1O95696 1058 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 ZNF445P59923 1031 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
TTC17-215ENST00000534417 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
TTC17-215ENST00000534417 RUFY2Q8WXA3 655 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 TTC14Q96N46 770 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 LMBRD1Q9NUN5 540 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
TTC17-215ENST00000534417 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 NEURL1BA8MQ27 555 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 HIP1O00291 1037 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 CYP27B1O15528 508 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
TTC17-215ENST00000534417 TM6SF1Q9BZW5 370 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 IL25Q9H293 177 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
TTC17-215ENST00000534417 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 STRCQ7RTU9 1775 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 GCKRQ14397 625 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
TTC17-215ENST00000534417 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
TTC17-215ENST00000534417 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 ZNF496Q96IT1 587 aaPredicted RBP12.72□□□□□ -0.37
TTC17-215ENST00000534417 FMNL2Q96PY5 1086 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
TTC17-215ENST00000534417 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
TTC17-215ENST00000534417 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 SNX14Q9Y5W7 946 aa12.72□□□□□ -0.37
TTC17-215ENST00000534417 SASH1O94885 1247 aa12.71□□□□□ -0.37
TTC17-215ENST00000534417 OS9Q13438 667 aaPredicted RBP12.71□□□□□ -0.37
TTC17-215ENST00000534417 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
TTC17-215ENST00000534417 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
TTC17-215ENST00000534417 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.38
TTC17-215ENST00000534417 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
TTC17-215ENST00000534417 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 IFIT2P09913 472 aaKnown RBP12.7□□□□□ -0.38
TTC17-215ENST00000534417 PKP1Q13835 747 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
TTC17-215ENST00000534417 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
TTC17-215ENST00000534417 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
TTC17-215ENST00000534417 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
TTC17-215ENST00000534417 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
TTC17-215ENST00000534417 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 MBD3O95983 291 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 CASP7P55210 303 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 SLC39A6Q13433 755 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 AACSQ86V21 672 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 TMEM87AQ8NBN3 555 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
TTC17-215ENST00000534417 EAF2Q96CJ1 260 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms