RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
PHRF1-206ENST00000534320 NUP62CLQ9H1M0 184 aa20.24■□□□□ 0.83
PHRF1-206ENST00000534320 CHD1O14646 1710 aa20.24■□□□□ 0.83
PHRF1-206ENST00000534320 SMC2O95347 1197 aa20.24■□□□□ 0.83
PHRF1-206ENST00000534320 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
PHRF1-206ENST00000534320 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
PHRF1-206ENST00000534320 SBNO1A3KN83 1393 aa20.23■□□□□ 0.83
PHRF1-206ENST00000534320 GRM8O00222 908 aa20.23■□□□□ 0.83
PHRF1-206ENST00000534320 TXLNAP40222 546 aa20.23■□□□□ 0.83
PHRF1-206ENST00000534320 IKQ13123 557 aaPredicted RBP20.23■□□□□ 0.83
PHRF1-206ENST00000534320 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
PHRF1-206ENST00000534320 LEKR1Q6ZMV7 388 aa20.22■□□□□ 0.83
PHRF1-206ENST00000534320 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
PHRF1-206ENST00000534320 PDILTQ8N807 584 aa20.22■□□□□ 0.83
PHRF1-206ENST00000534320 SYCE3A1L190 88 aa20.22■□□□□ 0.83
PHRF1-206ENST00000534320 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
PHRF1-206ENST00000534320 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
PHRF1-206ENST00000534320 GOLIM4O00461 696 aa20.21■□□□□ 0.83
PHRF1-206ENST00000534320 SPC24Q8NBT2 197 aa20.21■□□□□ 0.83
PHRF1-206ENST00000534320 SLC5A1P13866 664 aa20.21■□□□□ 0.83
PHRF1-206ENST00000534320 RBM10P98175 930 aaKnown RBP20.21■□□□□ 0.83
PHRF1-206ENST00000534320 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
PHRF1-206ENST00000534320 ZPR1O75312 459 aa20.2■□□□□ 0.82
PHRF1-206ENST00000534320 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
PHRF1-206ENST00000534320 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
PHRF1-206ENST00000534320 LDHAL6AQ6ZMR3 332 aa20.2■□□□□ 0.82
PHRF1-206ENST00000534320 LARP6Q9BRS8 491 aaKnown RBP20.2■□□□□ 0.82
PHRF1-206ENST00000534320 PRM3Q9NNZ6 103 aa20.2■□□□□ 0.82
PHRF1-206ENST00000534320 LINS1Q8NG48 757 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 WASF1Q92558 559 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 ESYT1Q9BSJ8 1104 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 NAPBQ9H115 298 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 MYOM2P54296 1465 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 KLHL34Q8N239 644 aa20.19■□□□□ 0.82
PHRF1-206ENST00000534320 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 CCDC43Q96MW1 224 aaKnown RBP20.18■□□□□ 0.82
PHRF1-206ENST00000534320 SCAND2PQ9GZW5 306 aaPredicted RBP20.18■□□□□ 0.82
PHRF1-206ENST00000534320 SIRT1Q96EB6 747 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 NOL7Q9UMY1 257 aaKnown RBP20.18■□□□□ 0.82
PHRF1-206ENST00000534320 CHL1O00533 1208 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 ZNF213O14771 459 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
PHRF1-206ENST00000534320 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
PHRF1-206ENST00000534320 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
PHRF1-206ENST00000534320 MAP3K11Q16584 847 aa20.17■□□□□ 0.82
PHRF1-206ENST00000534320 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
PHRF1-206ENST00000534320 ATP2B2Q01814 1243 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 PLEKHM2Q8IWE5 1019 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 USP8P40818 1118 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 G2E3Q7L622 706 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 NGLY1Q96IV0 654 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
PHRF1-206ENST00000534320 CDK5RAP3Q96JB5 506 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 HMG20BQ9P0W2 317 aa20.16■□□□□ 0.82
PHRF1-206ENST00000534320 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 MPNDQ8N594 471 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 BAG4O95429 457 aaKnown RBP20.15■□□□□ 0.82
PHRF1-206ENST00000534320 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
PHRF1-206ENST00000534320 SNX21Q969T3 373 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 TMX3Q96JJ7 454 aa20.15■□□□□ 0.82
PHRF1-206ENST00000534320 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.82
PHRF1-206ENST00000534320 CEP57L1Q8IYX8 460 aa20.14■□□□□ 0.82
PHRF1-206ENST00000534320 SERPINC1P01008 464 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 GJB2P29033 226 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 ANAPC15P60006 121 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 CWF19L2Q2TBE0 894 aaKnown RBP20.14■□□□□ 0.81
PHRF1-206ENST00000534320 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 PA2G4Q9UQ80 394 aaKnown RBP20.14■□□□□ 0.81
PHRF1-206ENST00000534320 CDC42BPAQ5VT25 1732 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 SYNMO15061 1565 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 SEC24BO95487 1268 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 LTKP29376 864 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 TTF1Q15361 905 aaPredicted RBP20.14■□□□□ 0.81
PHRF1-206ENST00000534320 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
PHRF1-206ENST00000534320 STX6O43752 255 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 DACH1Q9UI36 760 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
PHRF1-206ENST00000534320 NEK1Q96PY6 1258 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 IL2RBP14784 551 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 CAMK4Q16566 473 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 C8orf76Q96K31 380 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 DEF6Q9H4E7 631 aa20.13■□□□□ 0.81
PHRF1-206ENST00000534320 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
PHRF1-206ENST00000534320 TSPYL1Q9H0U9 437 aa20.12■□□□□ 0.81
PHRF1-206ENST00000534320 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
PHRF1-206ENST00000534320 ESPNB1AK53 854 aa20.11■□□□□ 0.81
PHRF1-206ENST00000534320 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
PHRF1-206ENST00000534320 HSPA2P54652 639 aa20.11■□□□□ 0.81
PHRF1-206ENST00000534320 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 CCT2P78371 535 aaKnown RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 CCDC196A0A1B0GTZ2 297 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms