RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 LAMB4A4D0S4 1761 aa16.68■□□□□ 0.26
FOXRED1-218ENST00000534315 METTL22Q9BUU2 404 aaPredicted RBP16.68■□□□□ 0.26
FOXRED1-218ENST00000534315 CARD10Q9BWT7 1032 aa16.68■□□□□ 0.26
FOXRED1-218ENST00000534315 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
FOXRED1-218ENST00000534315 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
FOXRED1-218ENST00000534315 MCM4P33991 863 aa16.67■□□□□ 0.26
FOXRED1-218ENST00000534315 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
FOXRED1-218ENST00000534315 IL2RBP14784 551 aa16.66■□□□□ 0.26
FOXRED1-218ENST00000534315 ANKRD13DQ6ZTN6 518 aa16.66■□□□□ 0.26
FOXRED1-218ENST00000534315 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
FOXRED1-218ENST00000534315 GCKRQ14397 625 aa16.66■□□□□ 0.26
FOXRED1-218ENST00000534315 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
FOXRED1-218ENST00000534315 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
FOXRED1-218ENST00000534315 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
FOXRED1-218ENST00000534315 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
FOXRED1-218ENST00000534315 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
FOXRED1-218ENST00000534315 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 IL25Q9H293 177 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 ST18O60284 1047 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 EVA1CP58658 441 aa16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
FOXRED1-218ENST00000534315 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
FOXRED1-218ENST00000534315 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 TNPO1Q92973 898 aaKnown RBP16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 SASH1O94885 1247 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 PALD1Q9ULE6 856 aa16.62■□□□□ 0.25
FOXRED1-218ENST00000534315 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 MCCP23508 829 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 NBPF10Q6P3W6 841 aaKnown RBP16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 NBPF15Q8N660 670 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 AACSQ86V21 672 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 SIL1Q9H173 461 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 ECHDC1Q9NTX5 307 aa16.61■□□□□ 0.25
FOXRED1-218ENST00000534315 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 PLBD2Q8NHP8 589 aa16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
FOXRED1-218ENST00000534315 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
FOXRED1-218ENST00000534315 SGSM2O43147 1006 aa16.59■□□□□ 0.25
FOXRED1-218ENST00000534315 NEK4P51957 841 aa16.59■□□□□ 0.25
FOXRED1-218ENST00000534315 ANAPC15P60006 121 aa16.59■□□□□ 0.25
FOXRED1-218ENST00000534315 UBE3BQ7Z3V4 1068 aa16.59■□□□□ 0.25
FOXRED1-218ENST00000534315 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.25
FOXRED1-218ENST00000534315 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
FOXRED1-218ENST00000534315 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.24
FOXRED1-218ENST00000534315 A1BGP04217 495 aa16.58■□□□□ 0.24
FOXRED1-218ENST00000534315 A0A087WZG4 1122 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 EPB41L2O43491 1005 aaKnown RBP16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 SSFA2P28290 1259 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 TTLL7Q6ZT98 887 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 BTG4Q9NY30 223 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 NUP188Q5SRE5 1749 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 COL15A1P39059 1388 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 TLR7Q9NYK1 1049 aaKnown RBP16.57■□□□□ 0.24
FOXRED1-218ENST00000534315 CASP7P55210 303 aa16.56■□□□□ 0.24
FOXRED1-218ENST00000534315 RABL6Q3YEC7 729 aaPredicted RBP16.56■□□□□ 0.24
FOXRED1-218ENST00000534315 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
FOXRED1-218ENST00000534315 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
FOXRED1-218ENST00000534315 RAD50Q92878 1312 aa16.56■□□□□ 0.24
FOXRED1-218ENST00000534315 TRAK2O60296 914 aa16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 HSPA4P34932 840 aa16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
FOXRED1-218ENST00000534315 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
FOXRED1-218ENST00000534315 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
FOXRED1-218ENST00000534315 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
FOXRED1-218ENST00000534315 MCM2P49736 904 aa16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 CWC22Q9HCG8 908 aaKnown RBP16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 ROBO1Q9Y6N7 1651 aa16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 TJP1Q07157 1748 aa16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 ZBTB3Q9H5J0 574 aa16.53■□□□□ 0.24
FOXRED1-218ENST00000534315 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
FOXRED1-218ENST00000534315 H7C1W4 665 aa16.52■□□□□ 0.24
FOXRED1-218ENST00000534315 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
FOXRED1-218ENST00000534315 RUFY2Q8WXA3 655 aa16.52■□□□□ 0.24
FOXRED1-218ENST00000534315 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.24
FOXRED1-218ENST00000534315 CYP2E1P05181 493 aaPredicted RBP16.51■□□□□ 0.23
FOXRED1-218ENST00000534315 NUCB2P80303 420 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms