RNA–Protein interactions for RNA: ENST00000534305.1

RELA-224, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-224ENST00000534305 GNAT3A8MTJ3 354 aa22.62■■□□□ 1.21
RELA-224ENST00000534305 SRGNP10124 158 aa22.62■■□□□ 1.21
RELA-224ENST00000534305 CTCFP49711 727 aaPredicted RBP22.62■■□□□ 1.21
RELA-224ENST00000534305 CCDC93Q567U6 631 aa22.62■■□□□ 1.21
RELA-224ENST00000534305 ZNF496Q96IT1 587 aaPredicted RBP22.62■■□□□ 1.21
RELA-224ENST00000534305 TBC1D2BQ9UPU7 963 aa22.62■■□□□ 1.21
RELA-224ENST00000534305 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
RELA-224ENST00000534305 PASKQ96RG2 1323 aa22.61■■□□□ 1.21
RELA-224ENST00000534305 ADAMTSL1Q8N6G6 1762 aa22.6■■□□□ 1.21
RELA-224ENST00000534305 TMEM88BA6NKF7 163 aa22.59■■□□□ 1.21
RELA-224ENST00000534305 FOXN1O15353 648 aa22.59■■□□□ 1.21
RELA-224ENST00000534305 CAMTA2O94983 1202 aa22.59■■□□□ 1.21
RELA-224ENST00000534305 TAF1DQ9H5J8 278 aaPredicted RBP22.59■■□□□ 1.21
RELA-224ENST00000534305 POTEIP0CG38 1075 aa22.58■■□□□ 1.21
RELA-224ENST00000534305 POTEJP0CG39 1038 aa22.58■■□□□ 1.21
RELA-224ENST00000534305 DZIP3Q86Y13 1208 aaKnown RBP22.58■■□□□ 1.21
RELA-224ENST00000534305 CLEC4GQ6UXB4 293 aa22.57■■□□□ 1.2
RELA-224ENST00000534305 CCDC24Q8N4L8 307 aa22.57■■□□□ 1.2
RELA-224ENST00000534305 COL3A1P02461 1466 aaPredicted RBP22.57■■□□□ 1.2
RELA-224ENST00000534305 CEMIPQ8WUJ3 1361 aa22.56■■□□□ 1.2
RELA-224ENST00000534305 RGL2O15211 777 aa22.56■■□□□ 1.2
RELA-224ENST00000534305 NPR1P16066 1061 aa22.56■■□□□ 1.2
RELA-224ENST00000534305 FKBP4Q02790 459 aaKnown RBP eCLIP22.56■■□□□ 1.2
RELA-224ENST00000534305 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
RELA-224ENST00000534305 NBPF5PQ86XG9 351 aaPredicted RBP22.56■■□□□ 1.2
RELA-224ENST00000534305 HACL1Q9UJ83 578 aa22.56■■□□□ 1.2
RELA-224ENST00000534305 LAMB4A4D0S4 1761 aa22.54■■□□□ 1.2
RELA-224ENST00000534305 EAPPQ56P03 285 aaPredicted RBP22.54■■□□□ 1.2
RELA-224ENST00000534305 RTKN2Q8IZC4 609 aa22.54■■□□□ 1.2
RELA-224ENST00000534305 U2SURPO15042 1029 aaKnown RBP22.53■■□□□ 1.2
RELA-224ENST00000534305 A1BGP04217 495 aa22.53■■□□□ 1.2
RELA-224ENST00000534305 IL17REQ8NFR9 667 aa22.53■■□□□ 1.2
RELA-224ENST00000534305 TRPM7Q96QT4 1865 aa22.53■■□□□ 1.2
RELA-224ENST00000534305 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
RELA-224ENST00000534305 VEGFBP49765 207 aa22.52■■□□□ 1.2
RELA-224ENST00000534305 CLEC11AQ9Y240 323 aa22.52■■□□□ 1.2
RELA-224ENST00000534305 THSD7BQ9C0I4 1608 aa22.52■■□□□ 1.2
RELA-224ENST00000534305 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
RELA-224ENST00000534305 EPHX2P34913 555 aa22.51■■□□□ 1.19
RELA-224ENST00000534305 TPTE2Q6XPS3 522 aa22.51■■□□□ 1.19
RELA-224ENST00000534305 MAP2K1Q02750 393 aaPredicted RBP22.5■■□□□ 1.19
RELA-224ENST00000534305 C7orf43Q8WVR3 580 aa22.5■■□□□ 1.19
RELA-224ENST00000534305 WBP1LQ9NX94 342 aa22.5■■□□□ 1.19
RELA-224ENST00000534305 ZNF541Q9H0D2 1346 aa22.5■■□□□ 1.19
RELA-224ENST00000534305 RASSF10A6NK89 507 aa22.49■■□□□ 1.19
RELA-224ENST00000534305 ITGBL1O95965 494 aaPredicted RBP22.49■■□□□ 1.19
RELA-224ENST00000534305 CC2D1BQ5T0F9 858 aaKnown RBP22.49■■□□□ 1.19
RELA-224ENST00000534305 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
RELA-224ENST00000534305 KIF7Q2M1P5 1343 aa22.49■■□□□ 1.19
RELA-224ENST00000534305 KLRG2A4D1S0 409 aaPredicted RBP22.48■■□□□ 1.19
RELA-224ENST00000534305 ALDH1B1P30837 517 aa22.48■■□□□ 1.19
RELA-224ENST00000534305 GPC2Q8N158 579 aa22.48■■□□□ 1.19
RELA-224ENST00000534305 ZNF277Q9NRM2 450 aaPredicted RBP22.48■■□□□ 1.19
RELA-224ENST00000534305 SNRPA1P09661 255 aaKnown RBP22.47■■□□□ 1.19
RELA-224ENST00000534305 IARSP41252 1262 aaKnown RBP22.47■■□□□ 1.19
RELA-224ENST00000534305 DEFB115Q30KQ5 88 aa22.47■■□□□ 1.19
RELA-224ENST00000534305 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
RELA-224ENST00000534305 LBX1P52954 281 aa22.46■■□□□ 1.19
RELA-224ENST00000534305 JDP2Q8WYK2 163 aa22.46■■□□□ 1.19
RELA-224ENST00000534305 RNF123Q5XPI4 1314 aa22.46■■□□□ 1.19
RELA-224ENST00000534305 NUP98P52948 1817 aa22.45■■□□□ 1.19
RELA-224ENST00000534305 FZD9O00144 591 aa22.45■■□□□ 1.18
RELA-224ENST00000534305 LMOD1P29536 600 aaPredicted RBP22.45■■□□□ 1.18
RELA-224ENST00000534305 CNTROBQ8N137 903 aa22.45■■□□□ 1.18
RELA-224ENST00000534305 RTF1Q92541 710 aaKnown RBP22.45■■□□□ 1.18
RELA-224ENST00000534305 ABT1Q9ULW3 272 aaKnown RBP22.45■■□□□ 1.18
RELA-224ENST00000534305 GTF2E1P29083 439 aaPredicted RBP22.44■■□□□ 1.18
RELA-224ENST00000534305 GRIPAP1Q4V328 841 aa22.44■■□□□ 1.18
RELA-224ENST00000534305 CC2D2BQ6DHV5 1058 aa22.44■■□□□ 1.18
RELA-224ENST00000534305 CFAP53Q96M91 514 aa22.44■■□□□ 1.18
RELA-224ENST00000534305 PSMD1Q99460 953 aa22.44■■□□□ 1.18
RELA-224ENST00000534305 WDR33Q9C0J8 1336 aaKnown RBP22.43■■□□□ 1.18
RELA-224ENST00000534305 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
RELA-224ENST00000534305 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
RELA-224ENST00000534305 ECE1P42892 770 aa22.43■■□□□ 1.18
RELA-224ENST00000534305 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
RELA-224ENST00000534305 BEGAINQ9BUH8 593 aa22.43■■□□□ 1.18
RELA-224ENST00000534305 NYXQ9GZU5 481 aa22.43■■□□□ 1.18
RELA-224ENST00000534305 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
RELA-224ENST00000534305 PRKAR2BP31323 418 aa22.42■■□□□ 1.18
RELA-224ENST00000534305 RIC1Q4ADV7 1423 aa22.41■■□□□ 1.18
RELA-224ENST00000534305 MAP1SQ66K74 1059 aaPredicted RBP22.41■■□□□ 1.18
RELA-224ENST00000534305 SYNE4Q8N205 404 aa22.41■■□□□ 1.18
RELA-224ENST00000534305 ABHD8Q96I13 439 aa22.41■■□□□ 1.18
RELA-224ENST00000534305 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
RELA-224ENST00000534305 KCNQ3O43525 872 aa22.4■■□□□ 1.18
RELA-224ENST00000534305 PIP4K2AP48426 406 aaPredicted RBP22.4■■□□□ 1.18
RELA-224ENST00000534305 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
RELA-224ENST00000534305 IBTKQ9P2D0 1353 aaPredicted RBP22.39■■□□□ 1.18
RELA-224ENST00000534305 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
RELA-224ENST00000534305 LTBP1Q14766 1721 aa22.38■■□□□ 1.17
RELA-224ENST00000534305 SLC34A2O95436 690 aa22.38■■□□□ 1.17
RELA-224ENST00000534305 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
RELA-224ENST00000534305 CRY2Q49AN0 593 aa22.37■■□□□ 1.17
RELA-224ENST00000534305 PAXIP1Q6ZW49 1069 aaPredicted RBP22.37■■□□□ 1.17
RELA-224ENST00000534305 RPGRQ92834 1020 aaKnown RBP22.37■■□□□ 1.17
RELA-224ENST00000534305 KDM3BQ7LBC6 1761 aa22.37■■□□□ 1.17
RELA-224ENST00000534305 FAM177BA6PVY3 158 aa22.36■■□□□ 1.17
RELA-224ENST00000534305 GJA3Q9Y6H8 435 aa22.36■■□□□ 1.17
RELA-224ENST00000534305 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms