RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 POTEJP0CG39 1038 aa20.12■□□□□ 0.81
CTSB-230ENST00000534149 ST5P78524 1137 aa20.12■□□□□ 0.81
CTSB-230ENST00000534149 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
CTSB-230ENST00000534149 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
CTSB-230ENST00000534149 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
CTSB-230ENST00000534149 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
CTSB-230ENST00000534149 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
CTSB-230ENST00000534149 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
CTSB-230ENST00000534149 SRGNP10124 158 aa20.1■□□□□ 0.81
CTSB-230ENST00000534149 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
CTSB-230ENST00000534149 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
CTSB-230ENST00000534149 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
CTSB-230ENST00000534149 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
CTSB-230ENST00000534149 MASTLQ96GX5 879 aa20.09■□□□□ 0.81
CTSB-230ENST00000534149 CREBZFQ9NS37 354 aa20.09■□□□□ 0.81
CTSB-230ENST00000534149 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
CTSB-230ENST00000534149 PHACTR3Q96KR7 559 aa20.07■□□□□ 0.8
CTSB-230ENST00000534149 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
CTSB-230ENST00000534149 NPC1L1Q9UHC9 1359 aa20.07■□□□□ 0.8
CTSB-230ENST00000534149 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
CTSB-230ENST00000534149 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
CTSB-230ENST00000534149 NBPF5PQ86XG9 351 aaPredicted RBP20.06■□□□□ 0.8
CTSB-230ENST00000534149 SCN4AP35499 1836 aa20.05■□□□□ 0.8
CTSB-230ENST00000534149 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
CTSB-230ENST00000534149 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
CTSB-230ENST00000534149 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
CTSB-230ENST00000534149 IQCA1LA6NCM1 817 aa20.03■□□□□ 0.8
CTSB-230ENST00000534149 LDHDQ86WU2 507 aa20.03■□□□□ 0.8
CTSB-230ENST00000534149 L3MBTL3Q96JM7 780 aaPredicted RBP20.03■□□□□ 0.8
CTSB-230ENST00000534149 TAF1DQ9H5J8 278 aaPredicted RBP20.03■□□□□ 0.8
CTSB-230ENST00000534149 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
CTSB-230ENST00000534149 PASKQ96RG2 1323 aa20.02■□□□□ 0.8
CTSB-230ENST00000534149 NPR1P16066 1061 aa20.02■□□□□ 0.8
CTSB-230ENST00000534149 OLFM4Q6UX06 510 aa20.02■□□□□ 0.8
CTSB-230ENST00000534149 CLEC4GQ6UXB4 293 aa20.02■□□□□ 0.8
CTSB-230ENST00000534149 ZNF652Q9Y2D9 606 aa20.02■□□□□ 0.8
CTSB-230ENST00000534149 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.79
CTSB-230ENST00000534149 SNRPA1P09661 255 aaKnown RBP20.01■□□□□ 0.79
CTSB-230ENST00000534149 MCM10Q7L590 875 aa20.01■□□□□ 0.79
CTSB-230ENST00000534149 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
CTSB-230ENST00000534149 FAM177BA6PVY3 158 aa20■□□□□ 0.79
CTSB-230ENST00000534149 FOXN1O15353 648 aa20■□□□□ 0.79
CTSB-230ENST00000534149 FKBP4Q02790 459 aaKnown RBP eCLIP20■□□□□ 0.79
CTSB-230ENST00000534149 EAPPQ56P03 285 aaPredicted RBP20■□□□□ 0.79
CTSB-230ENST00000534149 NIP7Q9Y221 180 aaKnown RBP eCLIP20■□□□□ 0.793e-7■■■■□ 21.9
CTSB-230ENST00000534149 KLRG2A4D1S0 409 aaPredicted RBP19.99■□□□□ 0.79
CTSB-230ENST00000534149 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
CTSB-230ENST00000534149 CFAP53Q96M91 514 aa19.99■□□□□ 0.79
CTSB-230ENST00000534149 NBPF26B4DH59 902 aa19.98■□□□□ 0.79
CTSB-230ENST00000534149 NBPF10Q6P3W6 841 aaKnown RBP19.98■□□□□ 0.79
CTSB-230ENST00000534149 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
CTSB-230ENST00000534149 NBPF15Q8N660 670 aa19.98■□□□□ 0.79
CTSB-230ENST00000534149 DCTN1Q14203 1278 aa19.97■□□□□ 0.79
CTSB-230ENST00000534149 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
CTSB-230ENST00000534149 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
CTSB-230ENST00000534149 TMEM88BA6NKF7 163 aa19.96■□□□□ 0.79
CTSB-230ENST00000534149 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
CTSB-230ENST00000534149 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
CTSB-230ENST00000534149 VEGFBP49765 207 aa19.96■□□□□ 0.79
CTSB-230ENST00000534149 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
CTSB-230ENST00000534149 RTKN2Q8IZC4 609 aa19.96■□□□□ 0.79
CTSB-230ENST00000534149 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
CTSB-230ENST00000534149 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
CTSB-230ENST00000534149 EPHX2P34913 555 aa19.95■□□□□ 0.78
CTSB-230ENST00000534149 HLFQ16534 295 aa19.95■□□□□ 0.78
CTSB-230ENST00000534149 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
CTSB-230ENST00000534149 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
CTSB-230ENST00000534149 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
CTSB-230ENST00000534149 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
CTSB-230ENST00000534149 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
CTSB-230ENST00000534149 FZD9O00144 591 aa19.93■□□□□ 0.78
CTSB-230ENST00000534149 RGL2O15211 777 aa19.93■□□□□ 0.78
CTSB-230ENST00000534149 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
CTSB-230ENST00000534149 PRDM10Q9NQV6 1147 aa19.93■□□□□ 0.78
CTSB-230ENST00000534149 ABCC12Q96J65 1359 aa19.93■□□□□ 0.78
CTSB-230ENST00000534149 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
CTSB-230ENST00000534149 CTCFP49711 727 aaPredicted RBP19.92■□□□□ 0.78
CTSB-230ENST00000534149 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
CTSB-230ENST00000534149 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
CTSB-230ENST00000534149 MIS18AQ9NYP9 233 aa19.91■□□□□ 0.78
CTSB-230ENST00000534149 NUP98P52948 1817 aa19.9■□□□□ 0.78
CTSB-230ENST00000534149 PNMA8AQ86V59 439 aaPredicted RBP19.9■□□□□ 0.78
CTSB-230ENST00000534149 NUTM1Q86Y26 1132 aa19.9■□□□□ 0.78
CTSB-230ENST00000534149 CNTROBQ8N137 903 aa19.9■□□□□ 0.78
CTSB-230ENST00000534149 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
CTSB-230ENST00000534149 COL4A5P29400 1685 aa19.9■□□□□ 0.78
CTSB-230ENST00000534149 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
CTSB-230ENST00000534149 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
CTSB-230ENST00000534149 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
CTSB-230ENST00000534149 GPC2Q8N158 579 aa19.89■□□□□ 0.77
CTSB-230ENST00000534149 PSMD1Q99460 953 aa19.89■□□□□ 0.77
CTSB-230ENST00000534149 WBP1LQ9NX94 342 aa19.89■□□□□ 0.77
CTSB-230ENST00000534149 LTBP1Q14766 1721 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 LBX1P52954 281 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 CRY2Q49AN0 593 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 JDP2Q8WYK2 163 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 KDM3BQ7LBC6 1761 aa19.88■□□□□ 0.77
CTSB-230ENST00000534149 DEFB115Q30KQ5 88 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms