RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 DDNO94850 711 aaPredicted RBP15.73■□□□□ 0.11
TTC39A-218ENST00000534098 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
TTC39A-218ENST00000534098 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
TTC39A-218ENST00000534098 SRGNP10124 158 aa15.73■□□□□ 0.11
TTC39A-218ENST00000534098 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
TTC39A-218ENST00000534098 PRPF40BQ6NWY9 871 aaKnown RBP15.73■□□□□ 0.11
TTC39A-218ENST00000534098 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
TTC39A-218ENST00000534098 ST5P78524 1137 aa15.72■□□□□ 0.11
TTC39A-218ENST00000534098 NPC1L1Q9UHC9 1359 aa15.72■□□□□ 0.11
TTC39A-218ENST00000534098 NPHP1O15259 732 aa15.71■□□□□ 0.11
TTC39A-218ENST00000534098 KCNQ3O43525 872 aa15.71■□□□□ 0.11
TTC39A-218ENST00000534098 SOGA3Q5TF21 947 aa15.71■□□□□ 0.11
TTC39A-218ENST00000534098 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.11
TTC39A-218ENST00000534098 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
TTC39A-218ENST00000534098 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
TTC39A-218ENST00000534098 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
TTC39A-218ENST00000534098 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
TTC39A-218ENST00000534098 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
TTC39A-218ENST00000534098 C7orf43Q8WVR3 580 aa15.69■□□□□ 0.1
TTC39A-218ENST00000534098 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
TTC39A-218ENST00000534098 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
TTC39A-218ENST00000534098 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
TTC39A-218ENST00000534098 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
TTC39A-218ENST00000534098 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
TTC39A-218ENST00000534098 CLEC4GQ6UXB4 293 aa15.68■□□□□ 0.1
TTC39A-218ENST00000534098 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
TTC39A-218ENST00000534098 PHACTR3Q96KR7 559 aa15.68■□□□□ 0.1
TTC39A-218ENST00000534098 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 LDHDQ86WU2 507 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 NBPF5PQ86XG9 351 aaPredicted RBP15.67■□□□□ 0.1
TTC39A-218ENST00000534098 RSPH6AQ9H0K4 717 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
TTC39A-218ENST00000534098 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
TTC39A-218ENST00000534098 NPR1P16066 1061 aa15.66■□□□□ 0.1
TTC39A-218ENST00000534098 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
TTC39A-218ENST00000534098 TAF1DQ9H5J8 278 aaPredicted RBP15.66■□□□□ 0.1
TTC39A-218ENST00000534098 FOXN1O15353 648 aa15.65■□□□□ 0.1
TTC39A-218ENST00000534098 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
TTC39A-218ENST00000534098 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
TTC39A-218ENST00000534098 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
TTC39A-218ENST00000534098 NUP98P52948 1817 aa15.65■□□□□ 0.1
TTC39A-218ENST00000534098 ZNF541Q9H0D2 1346 aa15.65■□□□□ 0.1
TTC39A-218ENST00000534098 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
TTC39A-218ENST00000534098 ZNF277Q9NRM2 450 aaPredicted RBP15.64■□□□□ 0.09
TTC39A-218ENST00000534098 NBPF26B4DH59 902 aa15.63■□□□□ 0.09
TTC39A-218ENST00000534098 RGL2O15211 777 aa15.63■□□□□ 0.09
TTC39A-218ENST00000534098 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
TTC39A-218ENST00000534098 NBPF10Q6P3W6 841 aaKnown RBP15.63■□□□□ 0.09
TTC39A-218ENST00000534098 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
TTC39A-218ENST00000534098 NBPF15Q8N660 670 aa15.63■□□□□ 0.09
TTC39A-218ENST00000534098 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 TPTE2Q6XPS3 522 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 MCM10Q7L590 875 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 PRDM10Q9NQV6 1147 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 HACL1Q9UJ83 578 aa15.62■□□□□ 0.09
TTC39A-218ENST00000534098 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
TTC39A-218ENST00000534098 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
TTC39A-218ENST00000534098 VEGFBP49765 207 aa15.61■□□□□ 0.09
TTC39A-218ENST00000534098 EAPPQ56P03 285 aaPredicted RBP15.61■□□□□ 0.09
TTC39A-218ENST00000534098 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
TTC39A-218ENST00000534098 CFAP53Q96M91 514 aa15.61■□□□□ 0.09
TTC39A-218ENST00000534098 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
TTC39A-218ENST00000534098 FZD9O00144 591 aa15.6■□□□□ 0.09
TTC39A-218ENST00000534098 EPHX2P34913 555 aa15.6■□□□□ 0.09
TTC39A-218ENST00000534098 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
TTC39A-218ENST00000534098 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 ALDH1B1P30837 517 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 IARSP41252 1262 aaKnown RBP15.59■□□□□ 0.09
TTC39A-218ENST00000534098 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 HLFQ16534 295 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 RNF123Q5XPI4 1314 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
TTC39A-218ENST00000534098 COL4A5P29400 1685 aa15.58■□□□□ 0.08
TTC39A-218ENST00000534098 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
TTC39A-218ENST00000534098 PNMA8AQ86V59 439 aaPredicted RBP15.58■□□□□ 0.08
TTC39A-218ENST00000534098 AIDAQ96BJ3 306 aa15.58■□□□□ 0.08
TTC39A-218ENST00000534098 WBP1LQ9NX94 342 aa15.58■□□□□ 0.08
TTC39A-218ENST00000534098 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
TTC39A-218ENST00000534098 ABCC12Q96J65 1359 aa15.58■□□□□ 0.08
TTC39A-218ENST00000534098 RASSF10A6NK89 507 aa15.57■□□□□ 0.08
TTC39A-218ENST00000534098 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
TTC39A-218ENST00000534098 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
TTC39A-218ENST00000534098 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
TTC39A-218ENST00000534098 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
TTC39A-218ENST00000534098 GPC2Q8N158 579 aa15.57■□□□□ 0.08
TTC39A-218ENST00000534098 PSMD1Q99460 953 aa15.57■□□□□ 0.08
TTC39A-218ENST00000534098 MAP1SQ66K74 1059 aaPredicted RBP15.56■□□□□ 0.08
TTC39A-218ENST00000534098 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
TTC39A-218ENST00000534098 THSD7BQ9C0I4 1608 aa15.56■□□□□ 0.08
TTC39A-218ENST00000534098 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
TTC39A-218ENST00000534098 GTF2E1P29083 439 aaPredicted RBP15.55■□□□□ 0.08
TTC39A-218ENST00000534098 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
TTC39A-218ENST00000534098 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
TTC39A-218ENST00000534098 LBX1P52954 281 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms