RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 KCNQ3O43525 872 aa19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 SRGNP10124 158 aa19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 PIP4K2AP48426 406 aaPredicted RBP19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 BCORQ6W2J9 1755 aa19.23■□□□□ 0.67
SHARPIN-208ENST00000533948 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
SHARPIN-208ENST00000533948 FOXN1O15353 648 aa19.22■□□□□ 0.67
SHARPIN-208ENST00000533948 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
SHARPIN-208ENST00000533948 ST5P78524 1137 aa19.21■□□□□ 0.67
SHARPIN-208ENST00000533948 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
SHARPIN-208ENST00000533948 CNTNAP1P78357 1384 aa19.2■□□□□ 0.66
SHARPIN-208ENST00000533948 SOGA3Q5TF21 947 aa19.2■□□□□ 0.66
SHARPIN-208ENST00000533948 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
SHARPIN-208ENST00000533948 PASKQ96RG2 1323 aa19.2■□□□□ 0.66
SHARPIN-208ENST00000533948 BTBD11A6QL63 1104 aa19.19■□□□□ 0.66
SHARPIN-208ENST00000533948 DZIP3Q86Y13 1208 aaKnown RBP19.19■□□□□ 0.66
SHARPIN-208ENST00000533948 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
SHARPIN-208ENST00000533948 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
SHARPIN-208ENST00000533948 OLFM4Q6UX06 510 aa19.18■□□□□ 0.66
SHARPIN-208ENST00000533948 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
SHARPIN-208ENST00000533948 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
SHARPIN-208ENST00000533948 ZNF541Q9H0D2 1346 aa19.18■□□□□ 0.66
SHARPIN-208ENST00000533948 SCN4AP35499 1836 aa19.17■□□□□ 0.66
SHARPIN-208ENST00000533948 LDHDQ86WU2 507 aa19.17■□□□□ 0.66
SHARPIN-208ENST00000533948 L3MBTL3Q96JM7 780 aaPredicted RBP19.17■□□□□ 0.66
SHARPIN-208ENST00000533948 ZNF277Q9NRM2 450 aaPredicted RBP19.17■□□□□ 0.66
SHARPIN-208ENST00000533948 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
SHARPIN-208ENST00000533948 IQCA1LA6NCM1 817 aa19.16■□□□□ 0.66
SHARPIN-208ENST00000533948 VEGFBP49765 207 aa19.16■□□□□ 0.66
SHARPIN-208ENST00000533948 EAPPQ56P03 285 aaPredicted RBP19.16■□□□□ 0.66
SHARPIN-208ENST00000533948 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
SHARPIN-208ENST00000533948 CCDC93Q567U6 631 aa19.15■□□□□ 0.66
SHARPIN-208ENST00000533948 CLEC4GQ6UXB4 293 aa19.15■□□□□ 0.66
SHARPIN-208ENST00000533948 NBPF5PQ86XG9 351 aaPredicted RBP19.15■□□□□ 0.66
SHARPIN-208ENST00000533948 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
SHARPIN-208ENST00000533948 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
SHARPIN-208ENST00000533948 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
SHARPIN-208ENST00000533948 RTF1Q92541 710 aaKnown RBP19.14■□□□□ 0.65
SHARPIN-208ENST00000533948 NUDCQ9Y266 331 aa19.14■□□□□ 0.65
SHARPIN-208ENST00000533948 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
SHARPIN-208ENST00000533948 TMEM88BA6NKF7 163 aa19.13■□□□□ 0.65
SHARPIN-208ENST00000533948 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHARPIN-208ENST00000533948 TPTE2Q6XPS3 522 aa19.13■□□□□ 0.65
SHARPIN-208ENST00000533948 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
SHARPIN-208ENST00000533948 ADAMTSL1Q8N6G6 1762 aa19.13■□□□□ 0.65
SHARPIN-208ENST00000533948 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
SHARPIN-208ENST00000533948 SNRPA1P09661 255 aaKnown RBP19.12■□□□□ 0.65
SHARPIN-208ENST00000533948 NPR1P16066 1061 aa19.12■□□□□ 0.65
SHARPIN-208ENST00000533948 PRKAR2BP31323 418 aa19.12■□□□□ 0.65
SHARPIN-208ENST00000533948 RNF123Q5XPI4 1314 aa19.11■□□□□ 0.65
SHARPIN-208ENST00000533948 CTCFP49711 727 aaPredicted RBP19.11■□□□□ 0.65
SHARPIN-208ENST00000533948 AIDAQ96BJ3 306 aa19.11■□□□□ 0.65
SHARPIN-208ENST00000533948 HACL1Q9UJ83 578 aa19.11■□□□□ 0.65
SHARPIN-208ENST00000533948 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
SHARPIN-208ENST00000533948 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 NBPF26B4DH59 902 aa19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 EPHX2P34913 555 aa19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 LBX1P52954 281 aa19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 MAP1SQ66K74 1059 aaPredicted RBP19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 NBPF10Q6P3W6 841 aaKnown RBP19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 NBPF15Q8N660 670 aa19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 NIP7Q9Y221 180 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHARPIN-208ENST00000533948 RTKN2Q8IZC4 609 aa19.09■□□□□ 0.65
SHARPIN-208ENST00000533948 RSPH6AQ9H0K4 717 aa19.09■□□□□ 0.65
SHARPIN-208ENST00000533948 WBP1LQ9NX94 342 aa19.09■□□□□ 0.65
SHARPIN-208ENST00000533948 GTF2E1P29083 439 aaPredicted RBP19.08■□□□□ 0.64
SHARPIN-208ENST00000533948 MCM10Q7L590 875 aa19.08■□□□□ 0.64
SHARPIN-208ENST00000533948 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 ALDH1B1P30837 517 aa19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 IARSP41252 1262 aaKnown RBP19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 HLFQ16534 295 aa19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 CNTROBQ8N137 903 aa19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 SYNE4Q8N205 404 aa19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 COL4A5P29400 1685 aa19.07■□□□□ 0.64
SHARPIN-208ENST00000533948 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 FZD9O00144 591 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 RGL2O15211 777 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 SLC51AQ86UW1 340 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 SNED1Q8TER0 1413 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
SHARPIN-208ENST00000533948 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
SHARPIN-208ENST00000533948 HSPA8P11142 646 aaKnown RBP19.05■□□□□ 0.64
SHARPIN-208ENST00000533948 FMR1Q06787 632 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHARPIN-208ENST00000533948 LTBP1Q14766 1721 aa19.05■□□□□ 0.64
SHARPIN-208ENST00000533948 DEFB115Q30KQ5 88 aa19.04■□□□□ 0.64
SHARPIN-208ENST00000533948 TAF7Q15545 349 aaPredicted RBP19.03■□□□□ 0.64
SHARPIN-208ENST00000533948 PNMA8AQ86V59 439 aaPredicted RBP19.03■□□□□ 0.64
SHARPIN-208ENST00000533948 NUTM1Q86Y26 1132 aa19.03■□□□□ 0.64
SHARPIN-208ENST00000533948 GPC2Q8N158 579 aa19.03■□□□□ 0.64
SHARPIN-208ENST00000533948 ABT1Q9ULW3 272 aaKnown RBP19.03■□□□□ 0.64
SHARPIN-208ENST00000533948 WDR33Q9C0J8 1336 aaKnown RBP19.02■□□□□ 0.64
SHARPIN-208ENST00000533948 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.64
SHARPIN-208ENST00000533948 NGEFQ8N5V2 710 aa19.01■□□□□ 0.63
SHARPIN-208ENST00000533948 JDP2Q8WYK2 163 aa19.01■□□□□ 0.63
SHARPIN-208ENST00000533948 ABHD8Q96I13 439 aa19.01■□□□□ 0.63
SHARPIN-208ENST00000533948 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms