RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 SGSM2O43147 1006 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 PPP1R42Q7Z4L9 355 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 PPP1R9BQ96SB3 815 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.81□□□□□ -14e-7■■■■□ 21.1
RNPC3-209ENST00000533834 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.81□□□□□ -1
RNPC3-209ENST00000533834 KIAA1551Q9HCM1 1747 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 RAB11FIP3O75154 756 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 KLHL40Q2TBA0 621 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 SPRYD3Q8NCJ5 442 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 ISY1Q9ULR0 285 aaKnown RBP8.81□□□□□ -1
RNPC3-209ENST00000533834 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 RABL6Q3YEC7 729 aaPredicted RBP8.81□□□□□ -1
RNPC3-209ENST00000533834 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
RNPC3-209ENST00000533834 AHDC1Q5TGY3 1603 aaPredicted RBP8.8□□□□□ -1
RNPC3-209ENST00000533834 DLEC1Q9Y238 1755 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 RHPN1Q8TCX5 695 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 RTF1Q92541 710 aaKnown RBP8.8□□□□□ -1
RNPC3-209ENST00000533834 PDLIM2Q96JY6 352 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 TIAM2Q8IVF5 1701 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 SOX12O15370 315 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 PHKG2P15735 406 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 INTS4Q96HW7 963 aaKnown RBP8.8□□□□□ -1
RNPC3-209ENST00000533834 CHAMP1Q96JM3 812 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
RNPC3-209ENST00000533834 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 PI4KAP2A4QPH2 592 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 CYP27B1O15528 508 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 ALDH1L1O75891 902 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 RASEFQ8IZ41 740 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 PI4KAP1Q8N8J0 262 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 TMX3Q96JJ7 454 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 SPATA31A3Q5VYP0 1347 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 TTC41PQ6P2S7 1318 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 CHD4Q14839 1912 aa8.79□□□□□ -1
RNPC3-209ENST00000533834 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
RNPC3-209ENST00000533834 NECTIN1Q15223 517 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 EPHA10Q5JZY3 1008 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 MPRIPQ6WCQ1 1025 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 PLSCR2Q9NRY7 297 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 SNX14Q9Y5W7 946 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 RFX7Q2KHR2 1363 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
RNPC3-209ENST00000533834 KSR2Q6VAB6 950 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 ALDH8A1Q9H2A2 487 aaPredicted RBP8.78□□□□□ -1
RNPC3-209ENST00000533834 HMMRO75330 724 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 ESCO1Q5FWF5 840 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 SUCLG2Q96I99 432 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
RNPC3-209ENST00000533834 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
RNPC3-209ENST00000533834 GRPEL1Q9HAV7 217 aa8.77□□□□□ -1
RNPC3-209ENST00000533834 SCN7AQ01118 1682 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 BTBD11A6QL63 1104 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
RNPC3-209ENST00000533834 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
RNPC3-209ENST00000533834 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
RNPC3-209ENST00000533834 ANXA1P04083 346 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 RUFY3Q7L099 469 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 KRT28Q7Z3Y7 464 aa8.77□□□□□ -1.01
RNPC3-209ENST00000533834 LARGE1O95461 756 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 SBF2Q86WG5 1849 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 ZNF790Q6PG37 636 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
RNPC3-209ENST00000533834 TAF6LQ9Y6J9 622 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 BCL9LQ86UU0 1499 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 ZNF609O15014 1411 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 NEURL1BA8MQ27 555 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 MRE11P49959 708 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 PTH1RQ03431 593 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 ZNF530Q6P9A1 599 aaPredicted RBP8.76□□□□□ -1.01
RNPC3-209ENST00000533834 FUCA2Q9BTY2 467 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 MAP3K2Q9Y2U5 619 aa8.76□□□□□ -1.01
RNPC3-209ENST00000533834 REC8O95072 547 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 UBTFL1P0CB47 393 aaPredicted RBP8.75□□□□□ -1.01
RNPC3-209ENST00000533834 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
RNPC3-209ENST00000533834 HYPKQ9NX55 129 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
RNPC3-209ENST00000533834 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 KIF1BPQ96EK5 621 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 PALLDQ8WX93 1383 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 FOXO4P98177 505 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 LINS1Q8NG48 757 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 EAF2Q96CJ1 260 aaPredicted RBP8.75□□□□□ -1.01
RNPC3-209ENST00000533834 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
RNPC3-209ENST00000533834 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 HAX1O00165 279 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 FOXP2O15409 715 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 NBPF14Q5TI25 921 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms