RNA–Protein interactions for RNA: ENST00000533787.1

CCDC84-207, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 1,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-207ENST00000533787 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
CCDC84-207ENST00000533787 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
CCDC84-207ENST00000533787 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
CCDC84-207ENST00000533787 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
CCDC84-207ENST00000533787 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
CCDC84-207ENST00000533787 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
CCDC84-207ENST00000533787 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
CCDC84-207ENST00000533787 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
CCDC84-207ENST00000533787 ST5P78524 1137 aa16.03■□□□□ 0.16
CCDC84-207ENST00000533787 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
CCDC84-207ENST00000533787 KCNQ3O43525 872 aa16.02■□□□□ 0.16
CCDC84-207ENST00000533787 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
CCDC84-207ENST00000533787 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
CCDC84-207ENST00000533787 MASTLQ96GX5 879 aa16.02■□□□□ 0.16
CCDC84-207ENST00000533787 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CCDC84-207ENST00000533787 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
CCDC84-207ENST00000533787 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
CCDC84-207ENST00000533787 SCN4AP35499 1836 aa16.01■□□□□ 0.15
CCDC84-207ENST00000533787 BTBD11A6QL63 1104 aa16■□□□□ 0.15
CCDC84-207ENST00000533787 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
CCDC84-207ENST00000533787 USP16Q9Y5T5 823 aa16■□□□□ 0.15
CCDC84-207ENST00000533787 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
CCDC84-207ENST00000533787 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
CCDC84-207ENST00000533787 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
CCDC84-207ENST00000533787 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
CCDC84-207ENST00000533787 NBPF5PQ86XG9 351 aaPredicted RBP15.98■□□□□ 0.15
CCDC84-207ENST00000533787 C7orf43Q8WVR3 580 aa15.98■□□□□ 0.15
CCDC84-207ENST00000533787 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
CCDC84-207ENST00000533787 PHACTR3Q96KR7 559 aa15.98■□□□□ 0.15
CCDC84-207ENST00000533787 PASKQ96RG2 1323 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 TAF1DQ9H5J8 278 aaPredicted RBP15.97■□□□□ 0.15
CCDC84-207ENST00000533787 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
CCDC84-207ENST00000533787 NPR1P16066 1061 aa15.96■□□□□ 0.15
CCDC84-207ENST00000533787 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
CCDC84-207ENST00000533787 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
CCDC84-207ENST00000533787 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
CCDC84-207ENST00000533787 SNRPA1P09661 255 aaKnown RBP15.95■□□□□ 0.14
CCDC84-207ENST00000533787 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
CCDC84-207ENST00000533787 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
CCDC84-207ENST00000533787 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
CCDC84-207ENST00000533787 FOXN1O15353 648 aa15.94■□□□□ 0.14
CCDC84-207ENST00000533787 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
CCDC84-207ENST00000533787 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
CCDC84-207ENST00000533787 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC84-207ENST00000533787 ADAMTSL1Q8N6G6 1762 aa15.93■□□□□ 0.14
CCDC84-207ENST00000533787 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
CCDC84-207ENST00000533787 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
CCDC84-207ENST00000533787 MCM10Q7L590 875 aa15.93■□□□□ 0.14
CCDC84-207ENST00000533787 TMEM88BA6NKF7 163 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 VEGFBP49765 207 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
CCDC84-207ENST00000533787 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
CCDC84-207ENST00000533787 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 HACL1Q9UJ83 578 aa15.92■□□□□ 0.14
CCDC84-207ENST00000533787 RGL2O15211 777 aa15.91■□□□□ 0.14
CCDC84-207ENST00000533787 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
CCDC84-207ENST00000533787 EPHX2P34913 555 aa15.9■□□□□ 0.14
CCDC84-207ENST00000533787 IARSP41252 1262 aaKnown RBP15.9■□□□□ 0.14
CCDC84-207ENST00000533787 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
CCDC84-207ENST00000533787 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
CCDC84-207ENST00000533787 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
CCDC84-207ENST00000533787 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
CCDC84-207ENST00000533787 FZD9O00144 591 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
CCDC84-207ENST00000533787 ALDH1B1P30837 517 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 CTCFP49711 727 aaPredicted RBP15.89■□□□□ 0.13
CCDC84-207ENST00000533787 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC84-207ENST00000533787 HLFQ16534 295 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
CCDC84-207ENST00000533787 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 AIDAQ96BJ3 306 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.13
CCDC84-207ENST00000533787 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
CCDC84-207ENST00000533787 MAP1SQ66K74 1059 aaPredicted RBP15.88■□□□□ 0.13
CCDC84-207ENST00000533787 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
CCDC84-207ENST00000533787 WBP1LQ9NX94 342 aa15.88■□□□□ 0.13
CCDC84-207ENST00000533787 NUP98P52948 1817 aa15.88■□□□□ 0.13
CCDC84-207ENST00000533787 SNED1Q8TER0 1413 aa15.87■□□□□ 0.13
CCDC84-207ENST00000533787 GPC2Q8N158 579 aa15.87■□□□□ 0.13
CCDC84-207ENST00000533787 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
CCDC84-207ENST00000533787 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
CCDC84-207ENST00000533787 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
CCDC84-207ENST00000533787 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
CCDC84-207ENST00000533787 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
CCDC84-207ENST00000533787 PSMD1Q99460 953 aa15.86■□□□□ 0.13
CCDC84-207ENST00000533787 COL4A5P29400 1685 aa15.86■□□□□ 0.13
CCDC84-207ENST00000533787 LBX1P52954 281 aa15.85■□□□□ 0.13
CCDC84-207ENST00000533787 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
CCDC84-207ENST00000533787 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
CCDC84-207ENST00000533787 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
CCDC84-207ENST00000533787 NYXQ9GZU5 481 aa15.85■□□□□ 0.13
CCDC84-207ENST00000533787 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms