RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ANXA1P04083 346 aa25.51■■□□□ 1.67
CHEK1-215ENST00000533778 NFIXQ14938 502 aa25.51■■□□□ 1.67
CHEK1-215ENST00000533778 COPS6Q7L5N1 327 aa25.51■■□□□ 1.67
CHEK1-215ENST00000533778 VAMP4O75379 141 aa25.5■■□□□ 1.67
CHEK1-215ENST00000533778 COL24A1Q17RW2 1714 aa25.5■■□□□ 1.67
CHEK1-215ENST00000533778 TTLL7Q6ZT98 887 aa25.5■■□□□ 1.67
CHEK1-215ENST00000533778 XAGE3Q8WTP9 111 aa25.5■■□□□ 1.67
CHEK1-215ENST00000533778 SETDB2Q96T68 719 aa25.49■■□□□ 1.67
CHEK1-215ENST00000533778 FHDC1Q9C0D6 1143 aaPredicted RBP25.49■■□□□ 1.67
CHEK1-215ENST00000533778 AIMP1Q12904 312 aaKnown RBP25.48■■□□□ 1.67
CHEK1-215ENST00000533778 TBC1D9BQ66K14 1250 aa25.48■■□□□ 1.67
CHEK1-215ENST00000533778 BICDL1Q6ZP65 573 aa25.48■■□□□ 1.67
CHEK1-215ENST00000533778 CDCA7LQ96GN5 454 aa25.48■■□□□ 1.67
CHEK1-215ENST00000533778 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
CHEK1-215ENST00000533778 POLRMTO00411 1230 aaKnown RBP25.47■■□□□ 1.67
CHEK1-215ENST00000533778 DDR1Q08345 913 aa25.47■■□□□ 1.67
CHEK1-215ENST00000533778 TRMT2AQ8IZ69 625 aaKnown RBP25.47■■□□□ 1.67
CHEK1-215ENST00000533778 KLHL34Q8N239 644 aa25.47■■□□□ 1.67
CHEK1-215ENST00000533778 ZBTB3Q9H5J0 574 aa25.47■■□□□ 1.67
CHEK1-215ENST00000533778 HLFQ16534 295 aa25.45■■□□□ 1.66
CHEK1-215ENST00000533778 GIGYF2Q6Y7W6 1299 aaKnown RBP25.45■■□□□ 1.66
CHEK1-215ENST00000533778 SYT17Q9BSW7 474 aa25.45■■□□□ 1.66
CHEK1-215ENST00000533778 SRCAPQ6ZRS2 3230 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 CARMIL3Q8ND23 1372 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 SERPINB2P05120 415 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 HSP90AB3PQ58FF7 597 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 ANKRD13DQ6ZTN6 518 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 PLBD2Q8NHP8 589 aa25.44■■□□□ 1.66
CHEK1-215ENST00000533778 NIP7Q9Y221 180 aaKnown RBP eCLIP25.44■■□□□ 1.66
CHEK1-215ENST00000533778 ZBED9Q6R2W3 1325 aa25.43■■□□□ 1.66
CHEK1-215ENST00000533778 DDX58O95786 925 aaKnown RBP25.43■■□□□ 1.66
CHEK1-215ENST00000533778 SLC4A2P04920 1241 aa25.43■■□□□ 1.66
CHEK1-215ENST00000533778 SCN7AQ01118 1682 aa25.42■■□□□ 1.66
CHEK1-215ENST00000533778 ZNF428Q96B54 188 aa25.42■■□□□ 1.66
CHEK1-215ENST00000533778 TCERG1O14776 1098 aaKnown RBP25.41■■□□□ 1.66
CHEK1-215ENST00000533778 NPHP1O15259 732 aa25.41■■□□□ 1.66
CHEK1-215ENST00000533778 PHAXQ9H814 394 aaKnown RBP25.41■■□□□ 1.66
CHEK1-215ENST00000533778 CT47B1P0C2W7 299 aaPredicted RBP25.4■■□□□ 1.66
CHEK1-215ENST00000533778 ATP10DQ9P241 1426 aa25.39■■□□□ 1.66
CHEK1-215ENST00000533778 TPTE2Q6XPS3 522 aa25.39■■□□□ 1.66
CHEK1-215ENST00000533778 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
CHEK1-215ENST00000533778 NBPF5PQ86XG9 351 aaPredicted RBP25.39■■□□□ 1.66
CHEK1-215ENST00000533778 TGFB2P61812 414 aa25.38■■□□□ 1.65
CHEK1-215ENST00000533778 TCIRG1Q13488 830 aa25.38■■□□□ 1.65
CHEK1-215ENST00000533778 PARP10Q53GL7 1025 aa25.38■■□□□ 1.65
CHEK1-215ENST00000533778 ZNF34Q8IZ26 560 aa25.38■■□□□ 1.65
CHEK1-215ENST00000533778 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
CHEK1-215ENST00000533778 BCORQ6W2J9 1755 aa25.37■■□□□ 1.65
CHEK1-215ENST00000533778 NYXQ9GZU5 481 aa25.37■■□□□ 1.65
CHEK1-215ENST00000533778 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
CHEK1-215ENST00000533778 ST5P78524 1137 aa25.36■■□□□ 1.65
CHEK1-215ENST00000533778 GPTP24298 496 aa25.35■■□□□ 1.65
CHEK1-215ENST00000533778 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
CHEK1-215ENST00000533778 KSR2Q6VAB6 950 aa25.35■■□□□ 1.65
CHEK1-215ENST00000533778 PPP1R42Q7Z4L9 355 aa25.35■■□□□ 1.65
CHEK1-215ENST00000533778 DCAF8L1A6NGE4 600 aa25.34■■□□□ 1.65
CHEK1-215ENST00000533778 FLIIQ13045 1269 aa25.34■■□□□ 1.65
CHEK1-215ENST00000533778 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
CHEK1-215ENST00000533778 NLGN2Q8NFZ4 835 aa25.33■■□□□ 1.65
CHEK1-215ENST00000533778 BRIP1Q9BX63 1249 aa25.33■■□□□ 1.65
CHEK1-215ENST00000533778 PDZRN3Q9UPQ7 1066 aa25.33■■□□□ 1.65
CHEK1-215ENST00000533778 FAM177BA6PVY3 158 aa25.32■■□□□ 1.64
CHEK1-215ENST00000533778 FKBP5Q13451 457 aaPredicted RBP25.32■■□□□ 1.64
CHEK1-215ENST00000533778 ALDH1L2Q3SY69 923 aa25.32■■□□□ 1.64
CHEK1-215ENST00000533778 G2E3Q7L622 706 aa25.32■■□□□ 1.64
CHEK1-215ENST00000533778 IBTKQ9P2D0 1353 aaPredicted RBP25.31■■□□□ 1.64
CHEK1-215ENST00000533778 PI4KAP2A4QPH2 592 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 PDE6BP35913 854 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 SUSD4Q5VX71 490 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 PI4KAP1Q8N8J0 262 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 UTP14AQ9BVJ6 771 aaKnown RBP25.31■■□□□ 1.64
CHEK1-215ENST00000533778 MAP3K2Q9Y2U5 619 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 UBN2Q6ZU65 1347 aa25.31■■□□□ 1.64
CHEK1-215ENST00000533778 TRIM28Q13263 835 aaKnown RBP25.3■■□□□ 1.64
CHEK1-215ENST00000533778 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
CHEK1-215ENST00000533778 ISCA1Q9BUE6 129 aa25.3■■□□□ 1.64
CHEK1-215ENST00000533778 METTL22Q9BUU2 404 aaPredicted RBP25.3■■□□□ 1.64
CHEK1-215ENST00000533778 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
CHEK1-215ENST00000533778 NEXNQ0ZGT2 675 aa25.29■■□□□ 1.64
CHEK1-215ENST00000533778 MRPL50Q8N5N7 158 aaKnown RBP25.28■■□□□ 1.64
CHEK1-215ENST00000533778 SSH1Q8WYL5 1049 aa25.28■■□□□ 1.64
CHEK1-215ENST00000533778 MYD88Q99836 296 aa25.28■■□□□ 1.64
CHEK1-215ENST00000533778 A0A0G2JLW4 131 aa25.27■■□□□ 1.64
CHEK1-215ENST00000533778 ATP5J2-PTCD1G3V325 749 aa25.27■■□□□ 1.64
CHEK1-215ENST00000533778 H0YIN7 160 aa25.27■■□□□ 1.64
CHEK1-215ENST00000533778 DPEP1P16444 411 aa25.27■■□□□ 1.64
CHEK1-215ENST00000533778 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
CHEK1-215ENST00000533778 NTSR2O95665 410 aa25.26■■□□□ 1.63
CHEK1-215ENST00000533778 CCDC24Q8N4L8 307 aa25.26■■□□□ 1.63
CHEK1-215ENST00000533778 SMC4Q9NTJ3 1288 aa25.26■■□□□ 1.63
CHEK1-215ENST00000533778 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
CHEK1-215ENST00000533778 ADCY9O60503 1353 aa25.26■■□□□ 1.63
CHEK1-215ENST00000533778 NUTM1Q86Y26 1132 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 C2CD5Q86YS7 1000 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 CCDC191Q8NCU4 936 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 DNAAF4Q8WXU2 420 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 PXDNLA1KZ92 1463 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 NUP98P52948 1817 aa25.25■■□□□ 1.63
CHEK1-215ENST00000533778 PTPRCP08575 1304 aa25.24■■□□□ 1.63
CHEK1-215ENST00000533778 SH3TC1Q8TE82 1336 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms