RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 TXLNAP40222 546 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 TBCELQ5QJ74 424 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 MCTP1Q6DN14 999 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 SCHIP1Q9P0W5 487 aaPredicted RBP6.85□□□□□ -1.31
BRCA2-205ENST00000533776 ARAFP10398 606 aa6.84□□□□□ -1.31
BRCA2-205ENST00000533776 TXKP42681 527 aa6.84□□□□□ -1.31
BRCA2-205ENST00000533776 TNP2Q05952 138 aa6.84□□□□□ -1.31
BRCA2-205ENST00000533776 TNS4Q8IZW8 715 aa6.84□□□□□ -1.31
BRCA2-205ENST00000533776 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.31
BRCA2-205ENST00000533776 HCN2Q9UL51 889 aa6.84□□□□□ -1.31
BRCA2-205ENST00000533776 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 HYAL3O43820 417 aaPredicted RBP6.83□□□□□ -1.32
BRCA2-205ENST00000533776 EPXP11678 715 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 FZD5Q13467 585 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 PRSS36Q5K4E3 855 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 TPCN2Q8NHX9 752 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 FMNL2Q96PY5 1086 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 ZNF232Q9UNY5 417 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 KIAA1024Q9UPX6 916 aa6.83□□□□□ -1.32
BRCA2-205ENST00000533776 FAM157BP0CG42 384 aa6.82□□□□□ -1.32
BRCA2-205ENST00000533776 EPHA4P54764 986 aa6.82□□□□□ -1.32
BRCA2-205ENST00000533776 BTBD6Q96KE9 485 aa6.82□□□□□ -1.32
BRCA2-205ENST00000533776 ATP9BO43861 1147 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 ADH6P28332 368 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 NOS2P35228 1153 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 CLDN10P78369 228 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 TEAD4Q15561 434 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 SH3PXD2AQ5TCZ1 1133 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
BRCA2-205ENST00000533776 ZBTB7BO15156 539 aaPredicted RBP6.8□□□□□ -1.32
BRCA2-205ENST00000533776 ATP1A2P50993 1020 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 PCBP4P57723 403 aaKnown RBP6.8□□□□□ -1.32
BRCA2-205ENST00000533776 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 CLUAP1Q96AJ1 413 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 MARK1Q9P0L2 795 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 KLF15Q9UIH9 416 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 PRR12Q9ULL5 1215 aa6.8□□□□□ -1.32
BRCA2-205ENST00000533776 SERTM1A2A2V5 107 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 EML1O00423 815 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 EFSO43281 561 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 PAX4O43316 350 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 DGKGP49619 791 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 LAMC2Q13753 1193 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 CHSY3Q70JA7 882 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 OGFOD1Q8N543 542 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 RHPN1Q8TCX5 695 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 ZNF594Q96JF6 807 aaPredicted RBP6.79□□□□□ -1.32
BRCA2-205ENST00000533776 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 TSPAN10Q9H1Z9 355 aaPredicted RBP6.79□□□□□ -1.32
BRCA2-205ENST00000533776 NEUROD4Q9HD90 331 aa6.79□□□□□ -1.32
BRCA2-205ENST00000533776 MKRN1Q9UHC7 482 aaKnown RBP6.79□□□□□ -1.32
BRCA2-205ENST00000533776 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
BRCA2-205ENST00000533776 AVENQ9NQS1 362 aaPredicted RBP6.78□□□□□ -1.32
BRCA2-205ENST00000533776 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
BRCA2-205ENST00000533776 PSMA6P60900 246 aaKnown RBP6.77□□□□□ -1.33
BRCA2-205ENST00000533776 CHMP3Q9Y3E7 222 aa6.77□□□□□ -1.33
BRCA2-205ENST00000533776 PALM3A6NDB9 673 aaPredicted RBP6.76□□□□□ -1.33
BRCA2-205ENST00000533776 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
BRCA2-205ENST00000533776 PROSER2Q86WR7 435 aaPredicted RBP6.76□□□□□ -1.33
BRCA2-205ENST00000533776 LARGE2Q8N3Y3 721 aa6.76□□□□□ -1.33
BRCA2-205ENST00000533776 TSEN2Q8NCE0 465 aaKnown RBP6.76□□□□□ -1.33
BRCA2-205ENST00000533776 GLMNQ92990 594 aa6.76□□□□□ -1.33
BRCA2-205ENST00000533776 HSH2DQ96JZ2 352 aa6.76□□□□□ -1.33
BRCA2-205ENST00000533776 HCN4Q9Y3Q4 1203 aa6.76□□□□□ -1.33
BRCA2-205ENST00000533776 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
BRCA2-205ENST00000533776 SFSWAPQ12872 951 aaKnown RBP6.75□□□□□ -1.33
BRCA2-205ENST00000533776 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
BRCA2-205ENST00000533776 SIX5Q8N196 739 aa6.75□□□□□ -1.33
BRCA2-205ENST00000533776 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
BRCA2-205ENST00000533776 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
BRCA2-205ENST00000533776 GPC6Q9Y625 555 aaPredicted RBP6.75□□□□□ -1.33
BRCA2-205ENST00000533776 M0R2N6 131 aa6.74□□□□□ -1.33
BRCA2-205ENST00000533776 PPP1R12BO60237 982 aaPredicted RBP6.74□□□□□ -1.33
BRCA2-205ENST00000533776 C7orf43Q8WVR3 580 aa6.74□□□□□ -1.33
BRCA2-205ENST00000533776 TFIP11Q9UBB9 837 aaKnown RBP6.74□□□□□ -1.33
BRCA2-205ENST00000533776 RASA1P20936 1047 aa6.73□□□□□ -1.33
BRCA2-205ENST00000533776 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
BRCA2-205ENST00000533776 FNBP4Q8N3X1 1017 aaPredicted RBP6.73□□□□□ -1.33
BRCA2-205ENST00000533776 SLC30A3Q99726 388 aa6.73□□□□□ -1.33
BRCA2-205ENST00000533776 MAFBQ9Y5Q3 323 aaPredicted RBP6.73□□□□□ -1.33
BRCA2-205ENST00000533776 ELOA3CA0A087WX78 387 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-205ENST00000533776 ELOA3DA6NLF2 546 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-205ENST00000533776 DKK1O94907 266 aa6.72□□□□□ -1.33
BRCA2-205ENST00000533776 HIRAP54198 1017 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-205ENST00000533776 ELOA3BQ3SY89 546 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms