RNA–Protein interactions for RNA: ENST00000533444.1

CYC1-204, Transcript of cytochrome c1, human

TSL 1 (best)

Gene CYC1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYC1-204	ENST00000533444	MYD88	Q99836	296 aa		32.79	■■■□□ 2.84
CYC1-204	ENST00000533444	TSHZ3	Q63HK5	1081 aa		32.79	■■■□□ 2.84
CYC1-204	ENST00000533444	COL16A1	Q07092	1604 aa	Predicted RBP	32.77	■■■□□ 2.84
CYC1-204	ENST00000533444	LTBP4	Q8N2S1	1624 aa		32.77	■■■□□ 2.84
CYC1-204	ENST00000533444	USP42	Q9H9J4	1324 aa	Known RBP	32.77	■■■□□ 2.84
CYC1-204	ENST00000533444	PLBD2	Q8NHP8	589 aa		32.77	■■■□□ 2.84
CYC1-204	ENST00000533444	AFDN	P55196	1824 aa	Known RBP	32.77	■■■□□ 2.84
CYC1-204	ENST00000533444	COL15A1	P39059	1388 aa		32.76	■■■□□ 2.83
CYC1-204	ENST00000533444	RABEP1	Q15276	862 aa		32.76	■■■□□ 2.83
CYC1-204	ENST00000533444	BICC1	Q9H694	974 aa	Known RBP	32.76	■■■□□ 2.83
CYC1-204	ENST00000533444	DISP2	A7MBM2	1401 aa		32.75	■■■□□ 2.83
CYC1-204	ENST00000533444	TRIM6-TRIM34	B2RNG4	842 aa		32.75	■■■□□ 2.83
CYC1-204	ENST00000533444	NUTM1	Q86Y26	1132 aa		32.75	■■■□□ 2.83
CYC1-204	ENST00000533444	KAZALD1	Q96I82	304 aa		32.75	■■■□□ 2.83
CYC1-204	ENST00000533444	TTC41P	Q6P2S7	1318 aa		32.73	■■■□□ 2.83
CYC1-204	ENST00000533444	CLASRP	Q8N2M8	674 aa	Known RBP	32.73	■■■□□ 2.83
CYC1-204	ENST00000533444	TMOD3	Q9NYL9	352 aa		32.73	■■■□□ 2.83
CYC1-204	ENST00000533444	RILPL2	Q969X0	211 aa		32.72	■■■□□ 2.83
CYC1-204	ENST00000533444	PI4K2B	Q8TCG2	481 aa		32.72	■■■□□ 2.83
CYC1-204	ENST00000533444	ESYT1	Q9BSJ8	1104 aa		32.72	■■■□□ 2.83
CYC1-204	ENST00000533444	PIP4K2A	P48426	406 aa	Predicted RBP	32.71	■■■□□ 2.83
CYC1-204	ENST00000533444	LRP6	O75581	1613 aa		32.71	■■■□□ 2.83
CYC1-204	ENST00000533444	NUP188	Q5SRE5	1749 aa		32.71	■■■□□ 2.83
CYC1-204	ENST00000533444	CHML	P26374	656 aa		32.7	■■■□□ 2.83
CYC1-204	ENST00000533444	NBPF26	B4DH59	902 aa		32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	NBPF14	Q5TI25	921 aa		32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	NBPF10	Q6P3W6	841 aa	Known RBP	32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	NBPF15	Q8N660	670 aa		32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	GPATCH3	Q96I76	525 aa		32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	CHMP5	Q9NZZ3	219 aa		32.7	■■■□□ 2.82
CYC1-204	ENST00000533444	WNK3	Q9BYP7	1800 aa		32.69	■■■□□ 2.82
CYC1-204	ENST00000533444		K7ELQ4	463 aa	Predicted RBP	32.68	■■■□□ 2.82
CYC1-204	ENST00000533444	AK9	Q5TCS8	1911 aa		32.68	■■■□□ 2.82
CYC1-204	ENST00000533444	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
CYC1-204	ENST00000533444	PA2G4	Q9UQ80	394 aa	Known RBP	32.67	■■■□□ 2.82
CYC1-204	ENST00000533444	PTCD1	O75127	700 aa	Known RBP	32.66	■■■□□ 2.82
CYC1-204	ENST00000533444	GLRX3	O76003	335 aa	Known RBP	32.66	■■■□□ 2.82
CYC1-204	ENST00000533444	EPB41L2	O43491	1005 aa	Known RBP	32.65	■■■□□ 2.82
CYC1-204	ENST00000533444	CNTROB	Q8N137	903 aa		32.65	■■■□□ 2.82
CYC1-204	ENST00000533444	SPRYD3	Q8NCJ5	442 aa		32.65	■■■□□ 2.82
CYC1-204	ENST00000533444	FRAT2	O75474	233 aa	Predicted RBP	32.65	■■■□□ 2.82
CYC1-204	ENST00000533444	PHLPP1	O60346	1717 aa		32.64	■■■□□ 2.82
CYC1-204	ENST00000533444	IFIT2	P09913	472 aa	Known RBP	32.64	■■■□□ 2.82
CYC1-204	ENST00000533444	UNC5CL	Q8IV45	518 aa		32.64	■■■□□ 2.82
CYC1-204	ENST00000533444	VSIG10	Q8N0Z9	540 aa		32.64	■■■□□ 2.82
CYC1-204	ENST00000533444	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.64	■■■□□ 2.82
CYC1-204	ENST00000533444	MCC	P23508	829 aa		32.63	■■■□□ 2.81
CYC1-204	ENST00000533444	RBM42	Q9BTD8	480 aa	Known RBP	32.63	■■■□□ 2.81
CYC1-204	ENST00000533444	RABL6	Q3YEC7	729 aa	Predicted RBP	32.63	■■■□□ 2.81
CYC1-204	ENST00000533444	ECHDC1	Q9NTX5	307 aa		32.63	■■■□□ 2.81
CYC1-204	ENST00000533444	ITGB4	P16144	1822 aa		32.61	■■■□□ 2.81
CYC1-204	ENST00000533444	A1BG	P04217	495 aa		32.61	■■■□□ 2.81
CYC1-204	ENST00000533444	UBE3B	Q7Z3V4	1068 aa		32.61	■■■□□ 2.81
CYC1-204	ENST00000533444	CIZ1	Q9ULV3	898 aa	Predicted RBP	32.61	■■■□□ 2.81
CYC1-204	ENST00000533444		A0A087WZG4	1122 aa		32.61	■■■□□ 2.81
CYC1-204	ENST00000533444	CD2BP2	O95400	341 aa	Known RBP	32.61	■■■□□ 2.81
CYC1-204	ENST00000533444	DDIT3	P35638	169 aa		32.6	■■■□□ 2.81
CYC1-204	ENST00000533444	EPHA10	Q5JZY3	1008 aa		32.6	■■■□□ 2.81
CYC1-204	ENST00000533444	ATP5J2-PTCD1	G3V325	749 aa		32.59	■■■□□ 2.81
CYC1-204	ENST00000533444	DEK	P35659	375 aa	Known RBP	32.59	■■■□□ 2.81
CYC1-204	ENST00000533444	AACS	Q86V21	672 aa		32.59	■■■□□ 2.81
CYC1-204	ENST00000533444	COPRS	Q9NQ92	184 aa		32.59	■■■□□ 2.81
CYC1-204	ENST00000533444	SASH1	O94885	1247 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	CASP7	P55210	303 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	TTLL7	Q6ZT98	887 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	PIGB	Q92521	554 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	NRAP	Q86VF7	1730 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	ST18	O60284	1047 aa		32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	CWC25	Q9NXE8	425 aa	Predicted RBP	32.58	■■■□□ 2.81
CYC1-204	ENST00000533444	TJP1	Q07157	1748 aa		32.57	■■■□□ 2.8
CYC1-204	ENST00000533444	HSP90AA1	P07900	732 aa	Known RBP	32.57	■■■□□ 2.8
CYC1-204	ENST00000533444	ANAPC15	P60006	121 aa		32.56	■■■□□ 2.8
CYC1-204	ENST00000533444	ANO2	Q9NQ90	1003 aa		32.56	■■■□□ 2.8
CYC1-204	ENST00000533444		H7C1W4	665 aa		32.56	■■■□□ 2.8
CYC1-204	ENST00000533444	EXOC5	O00471	708 aa		32.56	■■■□□ 2.8
CYC1-204	ENST00000533444	BCL9	O00512	1426 aa		32.55	■■■□□ 2.8
CYC1-204	ENST00000533444	CCDC191	Q8NCU4	936 aa		32.55	■■■□□ 2.8
CYC1-204	ENST00000533444	ATG3	Q9NT62	314 aa		32.54	■■■□□ 2.8
CYC1-204	ENST00000533444	RFX5	P48382	616 aa	Predicted RBP	32.54	■■■□□ 2.8
CYC1-204	ENST00000533444	ASAP1	Q9ULH1	1129 aa		32.54	■■■□□ 2.8
CYC1-204	ENST00000533444	STARD3NL	O95772	234 aa		32.53	■■■□□ 2.8
CYC1-204	ENST00000533444	MAP4K4	O95819	1239 aa	Predicted RBP	32.53	■■■□□ 2.8
CYC1-204	ENST00000533444	IL17RA	Q96F46	866 aa		32.53	■■■□□ 2.8
CYC1-204	ENST00000533444	SIL1	Q9H173	461 aa		32.53	■■■□□ 2.8
CYC1-204	ENST00000533444	IL27	Q8NEV9	243 aa		32.52	■■■□□ 2.8
CYC1-204	ENST00000533444	THRAP3	Q9Y2W1	955 aa	Known RBP	32.52	■■■□□ 2.8
CYC1-204	ENST00000533444	EAF2	Q96CJ1	260 aa	Predicted RBP	32.51	■■■□□ 2.8
CYC1-204	ENST00000533444	SGSM2	O43147	1006 aa		32.51	■■■□□ 2.79
CYC1-204	ENST00000533444	ZBTB3	Q9H5J0	574 aa		32.51	■■■□□ 2.79
CYC1-204	ENST00000533444	PTPN12	Q05209	780 aa	Known RBP	32.5	■■■□□ 2.79
CYC1-204	ENST00000533444	EVI5L	Q96CN4	794 aa		32.5	■■■□□ 2.79
CYC1-204	ENST00000533444	DNAJC10	Q8IXB1	793 aa		32.49	■■■□□ 2.79
CYC1-204	ENST00000533444	RUFY2	Q8WXA3	655 aa		32.49	■■■□□ 2.79
CYC1-204	ENST00000533444	JARID2	Q92833	1246 aa	Predicted RBP	32.49	■■■□□ 2.79
CYC1-204	ENST00000533444	KLHDC4	Q8TBB5	520 aa		32.49	■■■□□ 2.79
CYC1-204	ENST00000533444	KIF6	Q6ZMV9	814 aa		32.48	■■■□□ 2.79
CYC1-204	ENST00000533444	DIAPH3	Q9NSV4	1193 aa		32.47	■■■□□ 2.79
CYC1-204	ENST00000533444	NWD2	Q9ULI1	1742 aa		32.47	■■■□□ 2.79
CYC1-204	ENST00000533444	FOXO4	P98177	505 aa		32.47	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms