RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DEFB115Q30KQ5 88 aa10.65□□□□□ -0.7
NXF1-215ENST00000533440 MASTLQ96GX5 879 aa10.65□□□□□ -0.7
NXF1-215ENST00000533440 POLR3GLQ9BT43 218 aa10.65□□□□□ -0.7
NXF1-215ENST00000533440 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
NXF1-215ENST00000533440 RGS19P49795 217 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 MAP2K1Q02750 393 aaPredicted RBP10.64□□□□□ -0.71
NXF1-215ENST00000533440 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
NXF1-215ENST00000533440 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 TEX13AQ9BXU3 409 aaPredicted RBP10.64□□□□□ -0.71
NXF1-215ENST00000533440 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
NXF1-215ENST00000533440 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
NXF1-215ENST00000533440 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 EPHX2P34913 555 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 ST5P78524 1137 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 EAPPQ56P03 285 aaPredicted RBP10.63□□□□□ -0.71
NXF1-215ENST00000533440 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 ZNF496Q96IT1 587 aaPredicted RBP10.63□□□□□ -0.71
NXF1-215ENST00000533440 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
NXF1-215ENST00000533440 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
NXF1-215ENST00000533440 HMOX1P09601 288 aa10.62□□□□□ -0.71
NXF1-215ENST00000533440 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
NXF1-215ENST00000533440 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
NXF1-215ENST00000533440 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
NXF1-215ENST00000533440 CNTROBQ8N137 903 aa10.62□□□□□ -0.71
NXF1-215ENST00000533440 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
NXF1-215ENST00000533440 FZD9O00144 591 aa10.61□□□□□ -0.71
NXF1-215ENST00000533440 A1BGP04217 495 aa10.61□□□□□ -0.71
NXF1-215ENST00000533440 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
NXF1-215ENST00000533440 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
NXF1-215ENST00000533440 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
NXF1-215ENST00000533440 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
NXF1-215ENST00000533440 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
NXF1-215ENST00000533440 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 NPHP1O15259 732 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 NPR1P16066 1061 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
NXF1-215ENST00000533440 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
NXF1-215ENST00000533440 ZNF330Q9Y3S2 320 aaPredicted RBP10.6□□□□□ -0.71
NXF1-215ENST00000533440 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
NXF1-215ENST00000533440 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
NXF1-215ENST00000533440 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
NXF1-215ENST00000533440 GPC2Q8N158 579 aa10.59□□□□□ -0.71
NXF1-215ENST00000533440 ABT1Q9ULW3 272 aaKnown RBP10.59□□□□□ -0.71
NXF1-215ENST00000533440 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
NXF1-215ENST00000533440 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
NXF1-215ENST00000533440 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
NXF1-215ENST00000533440 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
NXF1-215ENST00000533440 TEFQ10587 303 aa10.58□□□□□ -0.72
NXF1-215ENST00000533440 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
NXF1-215ENST00000533440 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
NXF1-215ENST00000533440 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
NXF1-215ENST00000533440 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
NXF1-215ENST00000533440 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.72
NXF1-215ENST00000533440 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
NXF1-215ENST00000533440 ECE1P42892 770 aa10.57□□□□□ -0.72
NXF1-215ENST00000533440 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
NXF1-215ENST00000533440 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
NXF1-215ENST00000533440 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
NXF1-215ENST00000533440 LTBP1Q14766 1721 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 RGL2O15211 777 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
NXF1-215ENST00000533440 ALDH1B1P30837 517 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
NXF1-215ENST00000533440 FMR1Q06787 632 aaKnown RBP eCLIP10.56□□□□□ -0.72
NXF1-215ENST00000533440 CYP4F22Q6NT55 531 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 PSMD1Q99460 953 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
NXF1-215ENST00000533440 KCNQ3O43525 872 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 MAP2K2P36507 400 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 CST9Q5W186 159 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
NXF1-215ENST00000533440 COL4A5P29400 1685 aa10.54□□□□□ -0.72
NXF1-215ENST00000533440 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
NXF1-215ENST00000533440 SCNN1DP51172 638 aa10.54□□□□□ -0.72
NXF1-215ENST00000533440 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
NXF1-215ENST00000533440 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
NXF1-215ENST00000533440 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
NXF1-215ENST00000533440 TRPM7Q96QT4 1865 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 CA12O43570 354 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
NXF1-215ENST00000533440 EPS15P42566 896 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
NXF1-215ENST00000533440 PAXIP1Q6ZW49 1069 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms