RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
VAV3-215ENST00000533398 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
VAV3-215ENST00000533398 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
VAV3-215ENST00000533398 HTRA3P83110 453 aa12.12□□□□□ -0.47
VAV3-215ENST00000533398 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
VAV3-215ENST00000533398 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
VAV3-215ENST00000533398 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
VAV3-215ENST00000533398 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
VAV3-215ENST00000533398 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
VAV3-215ENST00000533398 MCM10Q7L590 875 aa12.11□□□□□ -0.47
VAV3-215ENST00000533398 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
VAV3-215ENST00000533398 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
VAV3-215ENST00000533398 A0A087WZG4 1122 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 H0YIN7 160 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
VAV3-215ENST00000533398 PPP2R1AP30153 589 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
VAV3-215ENST00000533398 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 C16orf71Q8IYS4 520 aaPredicted RBP12.1□□□□□ -0.47
VAV3-215ENST00000533398 TTLL6Q8N841 843 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
VAV3-215ENST00000533398 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
VAV3-215ENST00000533398 APLP1P51693 650 aa12.09□□□□□ -0.47
VAV3-215ENST00000533398 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
VAV3-215ENST00000533398 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.47
VAV3-215ENST00000533398 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
VAV3-215ENST00000533398 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 NFKBIEO00221 500 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 LMNB1P20700 586 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 DNAJC5GQ8N7S2 189 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
VAV3-215ENST00000533398 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
VAV3-215ENST00000533398 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
VAV3-215ENST00000533398 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
VAV3-215ENST00000533398 C21orf2O43822 256 aa12.07□□□□□ -0.48
VAV3-215ENST00000533398 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
VAV3-215ENST00000533398 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
VAV3-215ENST00000533398 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
VAV3-215ENST00000533398 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
VAV3-215ENST00000533398 NPHP1O15259 732 aa12.06□□□□□ -0.48
VAV3-215ENST00000533398 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
VAV3-215ENST00000533398 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
VAV3-215ENST00000533398 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
VAV3-215ENST00000533398 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
VAV3-215ENST00000533398 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
VAV3-215ENST00000533398 PCNTO95613 3336 aa12.06□□□□□ -0.48
VAV3-215ENST00000533398 DICER1Q9UPY3 1922 aaKnown RBP12.05□□□□□ -0.48
VAV3-215ENST00000533398 PDE6BP35913 854 aa12.05□□□□□ -0.48
VAV3-215ENST00000533398 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
VAV3-215ENST00000533398 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
VAV3-215ENST00000533398 GLTPD2A6NH11 291 aa12.04□□□□□ -0.48
VAV3-215ENST00000533398 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
VAV3-215ENST00000533398 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
VAV3-215ENST00000533398 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
VAV3-215ENST00000533398 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
VAV3-215ENST00000533398 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
VAV3-215ENST00000533398 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
VAV3-215ENST00000533398 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
VAV3-215ENST00000533398 ST5P78524 1137 aa12.03□□□□□ -0.48
VAV3-215ENST00000533398 FSTL1Q12841 308 aa12.03□□□□□ -0.48
VAV3-215ENST00000533398 SRGNP10124 158 aa12.02□□□□□ -0.49
VAV3-215ENST00000533398 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
VAV3-215ENST00000533398 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
VAV3-215ENST00000533398 NBPF5PQ86XG9 351 aaPredicted RBP12.02□□□□□ -0.49
VAV3-215ENST00000533398 NGEFQ8N5V2 710 aa12.02□□□□□ -0.49
VAV3-215ENST00000533398 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
VAV3-215ENST00000533398 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.49
VAV3-215ENST00000533398 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
VAV3-215ENST00000533398 POTECB2RU33 542 aa12.01□□□□□ -0.49
VAV3-215ENST00000533398 VEGFAP15692 232 aaPredicted RBP12.01□□□□□ -0.49
VAV3-215ENST00000533398 HLFQ16534 295 aa12.01□□□□□ -0.49
VAV3-215ENST00000533398 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
VAV3-215ENST00000533398 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
VAV3-215ENST00000533398 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
VAV3-215ENST00000533398 STYK1Q6J9G0 422 aa12□□□□□ -0.49
VAV3-215ENST00000533398 CNKSR1Q969H4 720 aa12□□□□□ -0.49
VAV3-215ENST00000533398 MASTLQ96GX5 879 aa12□□□□□ -0.49
VAV3-215ENST00000533398 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
VAV3-215ENST00000533398 NIP7Q9Y221 180 aaKnown RBP eCLIP12□□□□□ -0.49
VAV3-215ENST00000533398 NUP98P52948 1817 aa12□□□□□ -0.49
VAV3-215ENST00000533398 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
VAV3-215ENST00000533398 DDNO94850 711 aaPredicted RBP11.99□□□□□ -0.49
VAV3-215ENST00000533398 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
VAV3-215ENST00000533398 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
VAV3-215ENST00000533398 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
VAV3-215ENST00000533398 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
VAV3-215ENST00000533398 CLEC4GQ6UXB4 293 aa11.98□□□□□ -0.49
VAV3-215ENST00000533398 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
VAV3-215ENST00000533398 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
VAV3-215ENST00000533398 ABCC12Q96J65 1359 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 MYL6BP14649 208 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
VAV3-215ENST00000533398 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms