RNA–Protein interactions for RNA: ENST00000533226.2

NCAM1-216, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-216ENST00000533226 ST5P78524 1137 aa15.76■□□□□ 0.11
NCAM1-216ENST00000533226 FMNL2Q96PY5 1086 aa15.76■□□□□ 0.11
NCAM1-216ENST00000533226 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
NCAM1-216ENST00000533226 ARFGEF2Q9Y6D5 1785 aa15.75■□□□□ 0.11
NCAM1-216ENST00000533226 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
NCAM1-216ENST00000533226 COL3A1P02461 1466 aaPredicted RBP15.75■□□□□ 0.11
NCAM1-216ENST00000533226 SOGA3Q5TF21 947 aa15.74■□□□□ 0.11
NCAM1-216ENST00000533226 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
NCAM1-216ENST00000533226 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
NCAM1-216ENST00000533226 CNTNAP1P78357 1384 aa15.74■□□□□ 0.11
NCAM1-216ENST00000533226 IQCA1LA6NCM1 817 aa15.73■□□□□ 0.11
NCAM1-216ENST00000533226 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
NCAM1-216ENST00000533226 KCNQ3O43525 872 aa15.73■□□□□ 0.11
NCAM1-216ENST00000533226 PIP4K2AP48426 406 aaPredicted RBP15.73■□□□□ 0.11
NCAM1-216ENST00000533226 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
NCAM1-216ENST00000533226 LDHDQ86WU2 507 aa15.73■□□□□ 0.11
NCAM1-216ENST00000533226 FOXN1O15353 648 aa15.72■□□□□ 0.11
NCAM1-216ENST00000533226 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
NCAM1-216ENST00000533226 TAF1DQ9H5J8 278 aaPredicted RBP15.72■□□□□ 0.11
NCAM1-216ENST00000533226 PASKQ96RG2 1323 aa15.71■□□□□ 0.11
NCAM1-216ENST00000533226 SCN4AP35499 1836 aa15.71■□□□□ 0.11
NCAM1-216ENST00000533226 BTBD11A6QL63 1104 aa15.71■□□□□ 0.11
NCAM1-216ENST00000533226 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
NCAM1-216ENST00000533226 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.11
NCAM1-216ENST00000533226 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
NCAM1-216ENST00000533226 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
NCAM1-216ENST00000533226 C7orf43Q8WVR3 580 aa15.7■□□□□ 0.1
NCAM1-216ENST00000533226 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
NCAM1-216ENST00000533226 ZNF541Q9H0D2 1346 aa15.69■□□□□ 0.1
NCAM1-216ENST00000533226 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
NCAM1-216ENST00000533226 NPR1P16066 1061 aa15.69■□□□□ 0.1
NCAM1-216ENST00000533226 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
NCAM1-216ENST00000533226 ZNF277Q9NRM2 450 aaPredicted RBP15.69■□□□□ 0.1
NCAM1-216ENST00000533226 ZNF652Q9Y2D9 606 aa15.69■□□□□ 0.1
NCAM1-216ENST00000533226 TMEM88BA6NKF7 163 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 ITGBL1O95965 494 aaPredicted RBP15.68■□□□□ 0.1
NCAM1-216ENST00000533226 VEGFBP49765 207 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.1
NCAM1-216ENST00000533226 OLFM4Q6UX06 510 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 CLEC4GQ6UXB4 293 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 AIDAQ96BJ3 306 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
NCAM1-216ENST00000533226 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
NCAM1-216ENST00000533226 CTCFP49711 727 aaPredicted RBP15.67■□□□□ 0.1
NCAM1-216ENST00000533226 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
NCAM1-216ENST00000533226 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
NCAM1-216ENST00000533226 FAM177BA6PVY3 158 aa15.66■□□□□ 0.1
NCAM1-216ENST00000533226 EPHX2P34913 555 aa15.66■□□□□ 0.1
NCAM1-216ENST00000533226 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
NCAM1-216ENST00000533226 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
NCAM1-216ENST00000533226 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
NCAM1-216ENST00000533226 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
NCAM1-216ENST00000533226 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
NCAM1-216ENST00000533226 ADAMTSL1Q8N6G6 1762 aa15.65■□□□□ 0.1
NCAM1-216ENST00000533226 SNRPA1P09661 255 aaKnown RBP15.65■□□□□ 0.1
NCAM1-216ENST00000533226 RTKN2Q8IZC4 609 aa15.65■□□□□ 0.1
NCAM1-216ENST00000533226 RNF123Q5XPI4 1314 aa15.65■□□□□ 0.1
NCAM1-216ENST00000533226 NBPF26B4DH59 902 aa15.64■□□□□ 0.09
NCAM1-216ENST00000533226 MAP1SQ66K74 1059 aaPredicted RBP15.64■□□□□ 0.09
NCAM1-216ENST00000533226 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.09
NCAM1-216ENST00000533226 NBPF15Q8N660 670 aa15.64■□□□□ 0.09
NCAM1-216ENST00000533226 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
NCAM1-216ENST00000533226 LBX1P52954 281 aa15.63■□□□□ 0.09
NCAM1-216ENST00000533226 MCM10Q7L590 875 aa15.63■□□□□ 0.09
NCAM1-216ENST00000533226 PNMA8AQ86V59 439 aaPredicted RBP15.63■□□□□ 0.09
NCAM1-216ENST00000533226 CNTROBQ8N137 903 aa15.63■□□□□ 0.09
NCAM1-216ENST00000533226 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
NCAM1-216ENST00000533226 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
NCAM1-216ENST00000533226 WBP1LQ9NX94 342 aa15.63■□□□□ 0.09
NCAM1-216ENST00000533226 FZD9O00144 591 aa15.62■□□□□ 0.09
NCAM1-216ENST00000533226 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
NCAM1-216ENST00000533226 ALDH1B1P30837 517 aa15.62■□□□□ 0.09
NCAM1-216ENST00000533226 DEFB115Q30KQ5 88 aa15.62■□□□□ 0.09
NCAM1-216ENST00000533226 RASSF10A6NK89 507 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 RGL2O15211 777 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 HLFQ16534 295 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 GPC2Q8N158 579 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 CFAP53Q96M91 514 aa15.61■□□□□ 0.09
NCAM1-216ENST00000533226 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
NCAM1-216ENST00000533226 ABT1Q9ULW3 272 aaKnown RBP15.6■□□□□ 0.09
NCAM1-216ENST00000533226 ABCC12Q96J65 1359 aa15.6■□□□□ 0.09
NCAM1-216ENST00000533226 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
NCAM1-216ENST00000533226 HSPA8P11142 646 aaKnown RBP15.59■□□□□ 0.09
NCAM1-216ENST00000533226 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.09
NCAM1-216ENST00000533226 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
NCAM1-216ENST00000533226 PSMD1Q99460 953 aa15.59■□□□□ 0.09
NCAM1-216ENST00000533226 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
NCAM1-216ENST00000533226 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
NCAM1-216ENST00000533226 COL4A5P29400 1685 aa15.59■□□□□ 0.09
NCAM1-216ENST00000533226 LAMB4A4D0S4 1761 aa15.58■□□□□ 0.08
NCAM1-216ENST00000533226 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
NCAM1-216ENST00000533226 WDR33Q9C0J8 1336 aaKnown RBP15.58■□□□□ 0.08
NCAM1-216ENST00000533226 LTBP1Q14766 1721 aa15.57■□□□□ 0.08
NCAM1-216ENST00000533226 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
NCAM1-216ENST00000533226 MAP2K1Q02750 393 aaPredicted RBP15.57■□□□□ 0.08
NCAM1-216ENST00000533226 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
NCAM1-216ENST00000533226 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
NCAM1-216ENST00000533226 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms