RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-224ENST00000533129 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
CAPN1-224ENST00000533129 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
CAPN1-224ENST00000533129 SPATA31A3Q5VYP0 1347 aa17.75■□□□□ 0.43
CAPN1-224ENST00000533129 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
CAPN1-224ENST00000533129 TPM3P06753 285 aa17.75■□□□□ 0.43
CAPN1-224ENST00000533129 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-224ENST00000533129 NBPF6Q5VWK0 638 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 NBPF4Q96M43 638 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 CNPY2Q9Y2B0 182 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 F6X3S4 739 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 GNAI3P08754 354 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 G2E3Q7L622 706 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 LRRC37A3O60309 1634 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 MPNDQ8N594 471 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-224ENST00000533129 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
CAPN1-224ENST00000533129 ABCC6O95255 1503 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 TSC1Q92574 1164 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 C17orf53Q8N3J3 647 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-224ENST00000533129 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
CAPN1-224ENST00000533129 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
CAPN1-224ENST00000533129 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
CAPN1-224ENST00000533129 DIAPH3Q9NSV4 1193 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
CAPN1-224ENST00000533129 STX6O43752 255 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 HOMEZQ8IX15 550 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 RAD50Q92878 1312 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 TTC14Q96N46 770 aa17.71■□□□□ 0.43
CAPN1-224ENST00000533129 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-224ENST00000533129 F13A1P00488 732 aa17.7■□□□□ 0.42
CAPN1-224ENST00000533129 PPP4R3BQ5MIZ7 849 aa17.7■□□□□ 0.42
CAPN1-224ENST00000533129 RGPD2P0DJD1 1756 aa17.7■□□□□ 0.42
CAPN1-224ENST00000533129 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-224ENST00000533129 SYT1P21579 422 aa17.69■□□□□ 0.42
CAPN1-224ENST00000533129 ZC3H6P61129 1189 aaKnown RBP17.69■□□□□ 0.42
CAPN1-224ENST00000533129 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
CAPN1-224ENST00000533129 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-224ENST00000533129 CACNA1FO60840 1977 aa17.69■□□□□ 0.42
CAPN1-224ENST00000533129 IL25Q9H293 177 aa17.69■□□□□ 0.42
CAPN1-224ENST00000533129 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
CAPN1-224ENST00000533129 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-224ENST00000533129 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
CAPN1-224ENST00000533129 ERBB3P21860 1342 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 LMO7Q8WWI1 1683 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 CPDO75976 1380 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 GOLGA6L6A8MZA4 724 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 KCNF1Q9H3M0 494 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 PXDNLA1KZ92 1463 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 CBX1P83916 185 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 ANKRD7Q92527 254 aa17.68■□□□□ 0.42
CAPN1-224ENST00000533129 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 COL18A1P39060 1754 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 SGSM2O43147 1006 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 FIBPO43427 364 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 AK2P54819 239 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
CAPN1-224ENST00000533129 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-224ENST00000533129 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
CAPN1-224ENST00000533129 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-224ENST00000533129 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 PYCARDQ9ULZ3 195 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 AP5Z1O43299 807 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 KIF20AO95235 890 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 FLIIQ13045 1269 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 RUFY3Q7L099 469 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
CAPN1-224ENST00000533129 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
CAPN1-224ENST00000533129 RIOK3O14730 519 aaKnown RBP17.65■□□□□ 0.42
CAPN1-224ENST00000533129 CABLES1Q8TDN4 633 aa17.65■□□□□ 0.42
CAPN1-224ENST00000533129 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
CAPN1-224ENST00000533129 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
CAPN1-224ENST00000533129 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 RAB11FIP3O75154 756 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 CCDC192P0DO97 292 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 PLCB2Q00722 1185 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
CAPN1-224ENST00000533129 SSH3Q8TE77 659 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms