RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-211ENST00000533012 POLD1P28340 1107 aa14.38□□□□□ -0.11
TRAPPC4-211ENST00000533012 FKBP8Q14318 412 aa14.38□□□□□ -0.11
TRAPPC4-211ENST00000533012 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
TRAPPC4-211ENST00000533012 MAP3K15Q6ZN16 1313 aa14.38□□□□□ -0.11
TRAPPC4-211ENST00000533012 LAMB4A4D0S4 1761 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 RIC3Q7Z5B4 369 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 PLBD2Q8NHP8 589 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 SSH1Q8WYL5 1049 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
TRAPPC4-211ENST00000533012 UBR3Q6ZT12 1888 aa14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 RARSP54136 660 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 FLIIQ13045 1269 aa14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 HLFQ16534 295 aa14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 G2E3Q7L622 706 aa14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 SMC4Q9NTJ3 1288 aa14.36□□□□□ -0.11
TRAPPC4-211ENST00000533012 TM4SF1P30408 202 aa14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 HSP90AB3PQ58FF7 597 aa14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 GIGYF2Q6Y7W6 1299 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 BICDL1Q6ZP65 573 aa14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 SETDB2Q96T68 719 aa14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
TRAPPC4-211ENST00000533012 MMP10P09238 476 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 FKBP5Q13451 457 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 NFIXQ14938 502 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 KSR2Q6VAB6 950 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 BCL2L13Q9BXK5 485 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 QSER1Q2KHR3 1735 aa14.34□□□□□ -0.11
TRAPPC4-211ENST00000533012 PI4KAP2A4QPH2 592 aa14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 PTGER2P43116 358 aa14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 BRPF1P55201 1214 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 TCIRG1Q13488 830 aa14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 PI4KAP1Q8N8J0 262 aa14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.12
TRAPPC4-211ENST00000533012 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
TRAPPC4-211ENST00000533012 TUBGCP6Q96RT7 1819 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 SERPINB2P05120 415 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 ZNF34Q8IZ26 560 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 NOB1Q9ULX3 412 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 PTPRCP08575 1304 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 CASZ1Q86V15 1759 aa14.31□□□□□ -0.12
TRAPPC4-211ENST00000533012 POLRMTO00411 1230 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 NPHP1O15259 732 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 IPO8O15397 1037 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 BCAR3O75815 825 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 GPTP24298 496 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 DDR1Q08345 913 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 TPTE2Q6XPS3 522 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 MYD88Q99836 296 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
TRAPPC4-211ENST00000533012 ATP5J2-PTCD1G3V325 749 aa14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 TRIM28Q13263 835 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 ISCA1Q9BUE6 129 aa14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
TRAPPC4-211ENST00000533012 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 F6X3S4 739 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 C4AP0C0L4 1744 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 SUSD4Q5VX71 490 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 KIF16BQ96L93 1317 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
TRAPPC4-211ENST00000533012 ADCY9O60503 1353 aa14.27□□□□□ -0.12
TRAPPC4-211ENST00000533012 SLC4A10Q6U841 1118 aa14.27□□□□□ -0.13
TRAPPC4-211ENST00000533012 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
TRAPPC4-211ENST00000533012 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
TRAPPC4-211ENST00000533012 UBN2Q6ZU65 1347 aa14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 ST5P78524 1137 aa14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 CWC25Q9NXE8 425 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-211ENST00000533012 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
TRAPPC4-211ENST00000533012 ZKSCAN2Q63HK3 967 aa14.25□□□□□ -0.13
TRAPPC4-211ENST00000533012 PRR5LQ6MZQ0 368 aa14.25□□□□□ -0.13
TRAPPC4-211ENST00000533012 CD2APQ9Y5K6 639 aa14.25□□□□□ -0.13
TRAPPC4-211ENST00000533012 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
TRAPPC4-211ENST00000533012 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
TRAPPC4-211ENST00000533012 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
TRAPPC4-211ENST00000533012 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
TRAPPC4-211ENST00000533012 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 RNF123Q5XPI4 1314 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 ALDH1L1O75891 902 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 NTSR2O95665 410 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms