RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 CTAGE5O15320 804 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 GTPBP4Q9BZE4 634 aaKnown RBP11.12□□□□□ -0.63
BDNF-216ENST00000532997 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
BDNF-216ENST00000532997 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 KIF2AO00139 706 aaPredicted RBP11.12□□□□□ -0.63
BDNF-216ENST00000532997 FOXO3O43524 673 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 CDK11BP21127 795 aaKnown RBP11.12□□□□□ -0.63
BDNF-216ENST00000532997 ABTB2Q8N961 1025 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 HMG20BQ9P0W2 317 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 FERMT3Q86UX7 667 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
BDNF-216ENST00000532997 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 CBX1P83916 185 aa11.11□□□□□ -0.63
BDNF-216ENST00000532997 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
BDNF-216ENST00000532997 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
BDNF-216ENST00000532997 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
BDNF-216ENST00000532997 EYA1Q99502 592 aa11.11□□□□□ -0.63
BDNF-216ENST00000532997 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
BDNF-216ENST00000532997 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 HOXB7P09629 217 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 TYRO3Q06418 890 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 CAMK4Q16566 473 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
BDNF-216ENST00000532997 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 TNNT1P13805 278 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.1□□□□□ -0.63
BDNF-216ENST00000532997 PREX1Q8TCU6 1659 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 ZNF165P49910 485 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 CYB5RLQ6IPT4 315 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
BDNF-216ENST00000532997 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
BDNF-216ENST00000532997 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
BDNF-216ENST00000532997 CEP57L1Q8IYX8 460 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 TNRQ92752 1358 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 CCP110O43303 1012 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 FEZ1Q99689 392 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 CCDC66A2RUB6 948 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 CKAP2LQ8IYA6 745 aa11.09□□□□□ -0.63
BDNF-216ENST00000532997 ZSCAN16Q9H4T2 348 aaPredicted RBP11.09□□□□□ -0.63
BDNF-216ENST00000532997 SMTNL1A8MU46 457 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 STK3Q13188 491 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 GNL2Q13823 731 aaKnown RBP11.08□□□□□ -0.64
BDNF-216ENST00000532997 NUTM2GQ5VZR2 741 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 SDF4Q9BRK5 362 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 CCDC186Q7Z3E2 898 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 ANO10Q9NW15 660 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 ARGLU1Q9NWB6 273 aaPredicted RBP11.08□□□□□ -0.64
BDNF-216ENST00000532997 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 ANO6Q4KMQ2 910 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 LSG1Q9H089 658 aaKnown RBP11.08□□□□□ -0.64
BDNF-216ENST00000532997 DACT1Q9NYF0 836 aa11.08□□□□□ -0.64
BDNF-216ENST00000532997 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 CREB3L3Q68CJ9 461 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 C16orf45Q96MC5 204 aaPredicted RBP11.07□□□□□ -0.64
BDNF-216ENST00000532997 MTMR6Q9Y217 621 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 STX1AQ16623 288 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
BDNF-216ENST00000532997 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
BDNF-216ENST00000532997 METP08581 1390 aa11.07□□□□□ -0.64
BDNF-216ENST00000532997 PTGS1P23219 599 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 USP6P35125 1406 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 CRB1P82279 1406 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 GSDMDP57764 484 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
BDNF-216ENST00000532997 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
BDNF-216ENST00000532997 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
BDNF-216ENST00000532997 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 ELP1O95163 1332 aa11.06□□□□□ -0.64
BDNF-216ENST00000532997 KIF20AO95235 890 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 UTP14CQ5TAP6 766 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 SPTLC3Q9NUV7 552 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 KIAA1524Q8TCG1 905 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 CCDC34Q96HJ3 373 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms