RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 C8orf58Q8NAV2 365 aa25.39■■□□□ 1.66
CHID1-220ENST00000532909 STK31Q9BXU1 1019 aa25.39■■□□□ 1.66
CHID1-220ENST00000532909 SMC4Q9NTJ3 1288 aa25.39■■□□□ 1.66
CHID1-220ENST00000532909 KIAA1551Q9HCM1 1747 aa25.39■■□□□ 1.65
CHID1-220ENST00000532909 TEX13AQ9BXU3 409 aaPredicted RBP25.38■■□□□ 1.65
CHID1-220ENST00000532909 MIS18AQ9NYP9 233 aa25.38■■□□□ 1.65
CHID1-220ENST00000532909 ZBTB1Q9Y2K1 713 aa25.38■■□□□ 1.65
CHID1-220ENST00000532909 HEG1Q9ULI3 1381 aa25.38■■□□□ 1.65
CHID1-220ENST00000532909 CANXP27824 592 aaKnown RBP25.37■■□□□ 1.65
CHID1-220ENST00000532909 COL15A1P39059 1388 aa25.36■■□□□ 1.65
CHID1-220ENST00000532909 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
CHID1-220ENST00000532909 ARHGAP45Q92619 1136 aa25.36■■□□□ 1.65
CHID1-220ENST00000532909 SNRPA1P09661 255 aaKnown RBP25.35■■□□□ 1.65
CHID1-220ENST00000532909 POLRMTO00411 1230 aaKnown RBP25.34■■□□□ 1.65
CHID1-220ENST00000532909 PIM2Q9P1W9 311 aa25.34■■□□□ 1.65
CHID1-220ENST00000532909 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
CHID1-220ENST00000532909 STARD3NLO95772 234 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 KCNA3P22001 575 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 TM4SF1P30408 202 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 PDE3AQ14432 1141 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 TSPYL6Q8N831 410 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 SSH1Q8WYL5 1049 aa25.33■■□□□ 1.65
CHID1-220ENST00000532909 ERBB4Q15303 1308 aa25.33■■□□□ 1.64
CHID1-220ENST00000532909 CHRNA5P30532 468 aa25.32■■□□□ 1.64
CHID1-220ENST00000532909 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
CHID1-220ENST00000532909 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
CHID1-220ENST00000532909 ZNF496Q96IT1 587 aaPredicted RBP25.32■■□□□ 1.64
CHID1-220ENST00000532909 PTPRCP08575 1304 aa25.32■■□□□ 1.64
CHID1-220ENST00000532909 ELL2O00472 640 aaPredicted RBP25.31■■□□□ 1.64
CHID1-220ENST00000532909 NFIXQ14938 502 aa25.31■■□□□ 1.64
CHID1-220ENST00000532909 DALRD3Q5D0E6 543 aaKnown RBP25.31■■□□□ 1.64
CHID1-220ENST00000532909 ZNF330Q9Y3S2 320 aaPredicted RBP25.31■■□□□ 1.64
CHID1-220ENST00000532909 UBR2Q8IWV8 1755 aa25.3■■□□□ 1.64
CHID1-220ENST00000532909 API5Q9BZZ5 524 aaKnown RBP25.29■■□□□ 1.64
CHID1-220ENST00000532909 CHMP4BQ9H444 224 aaKnown RBP25.29■■□□□ 1.64
CHID1-220ENST00000532909 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
CHID1-220ENST00000532909 CACNA1FO60840 1977 aa25.28■■□□□ 1.64
CHID1-220ENST00000532909 BCAR3O75815 825 aa25.28■■□□□ 1.64
CHID1-220ENST00000532909 AAMPQ13685 434 aa25.28■■□□□ 1.64
CHID1-220ENST00000532909 MRPL50Q8N5N7 158 aaKnown RBP25.28■■□□□ 1.64
CHID1-220ENST00000532909 BICDL1Q6ZP65 573 aa25.27■■□□□ 1.64
CHID1-220ENST00000532909 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
CHID1-220ENST00000532909 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
CHID1-220ENST00000532909 SERPINB2P05120 415 aa25.26■■□□□ 1.63
CHID1-220ENST00000532909 A0A087WZG4 1122 aa25.25■■□□□ 1.63
CHID1-220ENST00000532909 KCNQ3O43525 872 aa25.25■■□□□ 1.63
CHID1-220ENST00000532909 EIF5P55010 431 aaKnown RBP25.25■■□□□ 1.63
CHID1-220ENST00000532909 ATF7IPQ6VMQ6 1270 aa25.25■■□□□ 1.63
CHID1-220ENST00000532909 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
CHID1-220ENST00000532909 HYPKQ9NX55 129 aa25.25■■□□□ 1.63
CHID1-220ENST00000532909 SLC4A2P04920 1241 aa25.24■■□□□ 1.63
CHID1-220ENST00000532909 KRT24Q2M2I5 525 aa25.24■■□□□ 1.63
CHID1-220ENST00000532909 C9orf131Q5VYM1 1079 aa25.24■■□□□ 1.63
CHID1-220ENST00000532909 NPM2Q86SE8 214 aaKnown RBP25.24■■□□□ 1.63
CHID1-220ENST00000532909 FTSJ3Q8IY81 847 aaKnown RBP25.24■■□□□ 1.63
CHID1-220ENST00000532909 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
CHID1-220ENST00000532909 KIF3CO14782 793 aa25.22■■□□□ 1.63
CHID1-220ENST00000532909 BCL2L13Q9BXK5 485 aa25.22■■□□□ 1.63
CHID1-220ENST00000532909 DDX21Q9NR30 783 aaKnown RBP eCLIP25.22■■□□□ 1.63
CHID1-220ENST00000532909 TBC1D2BQ9UPU7 963 aa25.22■■□□□ 1.63
CHID1-220ENST00000532909 ARFGEF1Q9Y6D6 1849 aa25.21■■□□□ 1.63
CHID1-220ENST00000532909 A1BGP04217 495 aa25.21■■□□□ 1.63
CHID1-220ENST00000532909 DZIP1LQ8IYY4 767 aaKnown RBP25.21■■□□□ 1.63
CHID1-220ENST00000532909 NOB1Q9ULX3 412 aaKnown RBP25.21■■□□□ 1.63
CHID1-220ENST00000532909 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.62
CHID1-220ENST00000532909 RNF181Q9P0P0 153 aa25.2■■□□□ 1.62
CHID1-220ENST00000532909 AFDNP55196 1824 aaKnown RBP25.2■■□□□ 1.62
CHID1-220ENST00000532909 DDX58O95786 925 aaKnown RBP25.19■■□□□ 1.62
CHID1-220ENST00000532909 IL6STP40189 918 aaPredicted RBP25.19■■□□□ 1.62
CHID1-220ENST00000532909 TBC1D9BQ66K14 1250 aa25.19■■□□□ 1.62
CHID1-220ENST00000532909 CEP350Q5VT06 3117 aa25.19■■□□□ 1.62
CHID1-220ENST00000532909 HSPA6P17066 643 aa25.18■■□□□ 1.62
CHID1-220ENST00000532909 C2CD5Q86YS7 1000 aa25.18■■□□□ 1.62
CHID1-220ENST00000532909 NMRK2Q9NPI5 230 aa25.18■■□□□ 1.62
CHID1-220ENST00000532909 CARMIL3Q8ND23 1372 aa25.17■■□□□ 1.62
CHID1-220ENST00000532909 H0YIN7 160 aa25.16■■□□□ 1.62
CHID1-220ENST00000532909 TRIM27P14373 513 aa25.16■■□□□ 1.62
CHID1-220ENST00000532909 FLIIQ13045 1269 aa25.16■■□□□ 1.62
CHID1-220ENST00000532909 NRXN2Q9P2S2 1712 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 NPHP1O15259 732 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 PIP4K2AP48426 406 aaPredicted RBP25.15■■□□□ 1.62
CHID1-220ENST00000532909 TTLL6Q8N841 843 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 CHPF2Q9P2E5 772 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 USP16Q9Y5T5 823 aa25.15■■□□□ 1.62
CHID1-220ENST00000532909 PLIN1O60240 522 aa25.14■■□□□ 1.62
CHID1-220ENST00000532909 RASSF7Q02833 373 aa25.14■■□□□ 1.62
CHID1-220ENST00000532909 CCDC24Q8N4L8 307 aa25.14■■□□□ 1.62
CHID1-220ENST00000532909 DDX19BQ9UMR2 479 aa25.14■■□□□ 1.62
CHID1-220ENST00000532909 PRAMEF22A3QJZ6 481 aa25.13■■□□□ 1.61
CHID1-220ENST00000532909 FKBP5Q13451 457 aaPredicted RBP25.13■■□□□ 1.61
CHID1-220ENST00000532909 DZIP3Q86Y13 1208 aaKnown RBP25.13■■□□□ 1.61
CHID1-220ENST00000532909 ABCC4O15439 1325 aa25.12■■□□□ 1.61
CHID1-220ENST00000532909 TOMM70O94826 608 aa25.12■■□□□ 1.61
CHID1-220ENST00000532909 CCT4P50991 539 aaKnown RBP25.12■■□□□ 1.61
CHID1-220ENST00000532909 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
CHID1-220ENST00000532909 SCN7AQ01118 1682 aa25.12■■□□□ 1.61
CHID1-220ENST00000532909 CAMTA2O94983 1202 aa25.11■■□□□ 1.61
CHID1-220ENST00000532909 C16orf71Q8IYS4 520 aaPredicted RBP25.11■■□□□ 1.61
CHID1-220ENST00000532909 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms