RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 WDR17Q8IZU2 1322 aa21.8■■□□□ 1.08
UBXN1-213ENST00000532904 CHMLP26374 656 aa21.79■■□□□ 1.08
UBXN1-213ENST00000532904 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.79■■□□□ 1.08
UBXN1-213ENST00000532904 KIAA1211Q6ZU35 1233 aa21.79■■□□□ 1.08
UBXN1-213ENST00000532904 PRDM11Q9NQV5 511 aa21.79■■□□□ 1.08
UBXN1-213ENST00000532904 TSHZ3Q63HK5 1081 aa21.79■■□□□ 1.08
UBXN1-213ENST00000532904 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
UBXN1-213ENST00000532904 GLIPR1L2Q4G1C9 344 aa21.78■■□□□ 1.08
UBXN1-213ENST00000532904 CHAMP1Q96JM3 812 aa21.78■■□□□ 1.08
UBXN1-213ENST00000532904 NSFL1CQ9UNZ2 370 aaKnown RBP21.78■■□□□ 1.08
UBXN1-213ENST00000532904 COL5A2P05997 1499 aaPredicted RBP21.78■■□□□ 1.08
UBXN1-213ENST00000532904 TERF1P54274 439 aa21.78■■□□□ 1.08
UBXN1-213ENST00000532904 SRCIN1Q9C0H9 1055 aa21.78■■□□□ 1.08
UBXN1-213ENST00000532904 PALD1Q9ULE6 856 aa21.78■■□□□ 1.08
UBXN1-213ENST00000532904 PNMA6EA0A0J9YXQ4 647 aa21.77■■□□□ 1.08
UBXN1-213ENST00000532904 ZNF500O60304 480 aaPredicted RBP21.77■■□□□ 1.08
UBXN1-213ENST00000532904 AOX1Q06278 1338 aa21.76■■□□□ 1.07
UBXN1-213ENST00000532904 SYCE3A1L190 88 aa21.76■■□□□ 1.07
UBXN1-213ENST00000532904 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
UBXN1-213ENST00000532904 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
UBXN1-213ENST00000532904 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.76■■□□□ 1.07
UBXN1-213ENST00000532904 CYP27B1O15528 508 aa21.75■■□□□ 1.07
UBXN1-213ENST00000532904 EPB41L2O43491 1005 aaKnown RBP21.75■■□□□ 1.07
UBXN1-213ENST00000532904 DNAAF4Q8WXU2 420 aa21.75■■□□□ 1.07
UBXN1-213ENST00000532904 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
UBXN1-213ENST00000532904 FOXD4L5Q5VV16 416 aaPredicted RBP21.75■■□□□ 1.07
UBXN1-213ENST00000532904 FOXD4L4Q8WXT5 416 aaPredicted RBP21.75■■□□□ 1.07
UBXN1-213ENST00000532904 TRIM6-TRIM34B2RNG4 842 aa21.74■■□□□ 1.07
UBXN1-213ENST00000532904 RILPL2Q969X0 211 aa21.74■■□□□ 1.07
UBXN1-213ENST00000532904 HYPKQ9NX55 129 aa21.74■■□□□ 1.07
UBXN1-213ENST00000532904 MCM5P33992 734 aa21.73■■□□□ 1.07
UBXN1-213ENST00000532904 BEND3Q5T5X7 828 aa21.73■■□□□ 1.07
UBXN1-213ENST00000532904 C5P01031 1676 aa21.73■■□□□ 1.07
UBXN1-213ENST00000532904 ADCY9O60503 1353 aa21.73■■□□□ 1.07
UBXN1-213ENST00000532904 UBTFL1P0CB47 393 aaPredicted RBP21.72■■□□□ 1.07
UBXN1-213ENST00000532904 CARD10Q9BWT7 1032 aa21.72■■□□□ 1.07
UBXN1-213ENST00000532904 PI4KAP2A4QPH2 592 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 PI4KAP1Q8N8J0 262 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
UBXN1-213ENST00000532904 ZKSCAN5Q9Y2L8 839 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 LRRFIP2Q9Y608 721 aaKnown RBP21.71■■□□□ 1.07
UBXN1-213ENST00000532904 TOM1L2Q6ZVM7 507 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
UBXN1-213ENST00000532904 UNC5CLQ8IV45 518 aa21.7■■□□□ 1.06
UBXN1-213ENST00000532904 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
UBXN1-213ENST00000532904 CCDC39Q9UFE4 941 aa21.7■■□□□ 1.06
UBXN1-213ENST00000532904 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
UBXN1-213ENST00000532904 SYAP1Q96A49 352 aaPredicted RBP21.69■■□□□ 1.06
UBXN1-213ENST00000532904 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
UBXN1-213ENST00000532904 HSPA4P34932 840 aa21.68■■□□□ 1.06
UBXN1-213ENST00000532904 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
UBXN1-213ENST00000532904 SSH3Q8TE77 659 aa21.68■■□□□ 1.06
UBXN1-213ENST00000532904 TSPY26PQ9H489 355 aa21.68■■□□□ 1.06
UBXN1-213ENST00000532904 SHANK3Q9BYB0 1731 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 SLC39A6Q13433 755 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
UBXN1-213ENST00000532904 WDR33Q9C0J8 1336 aaKnown RBP21.67■■□□□ 1.06
UBXN1-213ENST00000532904 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 RAB11FIP3O75154 756 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 DDX58O95786 925 aaKnown RBP21.67■■□□□ 1.06
UBXN1-213ENST00000532904 ANXA1P04083 346 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 PDIA6Q15084 440 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
UBXN1-213ENST00000532904 PROSER3Q2NL68 480 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
UBXN1-213ENST00000532904 HDAC5Q9UQL6 1122 aa21.67■■□□□ 1.06
UBXN1-213ENST00000532904 LAMB4A4D0S4 1761 aa21.66■■□□□ 1.06
UBXN1-213ENST00000532904 IL2RBP14784 551 aa21.66■■□□□ 1.06
UBXN1-213ENST00000532904 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
UBXN1-213ENST00000532904 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
UBXN1-213ENST00000532904 CABP4P57796 275 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 CSPP1Q1MSJ5 1256 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 IL25Q9H293 177 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 PDCL3Q9H2J4 239 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 COL22A1Q8NFW1 1626 aaPredicted RBP21.65■■□□□ 1.06
UBXN1-213ENST00000532904 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 ERVV-2B6SEH9 535 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 POLA2Q14181 598 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 ZNF496Q96IT1 587 aaPredicted RBP21.65■■□□□ 1.06
UBXN1-213ENST00000532904 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 MAP3K2Q9Y2U5 619 aa21.65■■□□□ 1.06
UBXN1-213ENST00000532904 GLI3P10071 1580 aa21.64■■□□□ 1.06
UBXN1-213ENST00000532904 PHF14O94880 888 aa21.64■■□□□ 1.05
UBXN1-213ENST00000532904 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
UBXN1-213ENST00000532904 UBR2Q8IWV8 1755 aa21.64■■□□□ 1.05
UBXN1-213ENST00000532904 COL14A1Q05707 1796 aaKnown RBP21.64■■□□□ 1.05
UBXN1-213ENST00000532904 TMEM87AQ8NBN3 555 aa21.64■■□□□ 1.05
UBXN1-213ENST00000532904 RNF214Q8ND24 703 aa21.64■■□□□ 1.05
UBXN1-213ENST00000532904 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
UBXN1-213ENST00000532904 RAD50Q92878 1312 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 EVA1CP58658 441 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 PAPPAQ13219 1627 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 USP48Q86UV5 1035 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 NUTM1Q86Y26 1132 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 LINS1Q8NG48 757 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 PI4K2BQ8TCG2 481 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 RPAP1Q9BWH6 1393 aaPredicted RBP21.62■■□□□ 1.05
UBXN1-213ENST00000532904 SGSM2O43147 1006 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms