RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 CAMTA2O94983 1202 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
BRPF3-210ENST00000532538 ERFEQ4G0M1 354 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
BRPF3-210ENST00000532538 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
BRPF3-210ENST00000532538 NFKBIEO00221 500 aa20.21■□□□□ 0.83
BRPF3-210ENST00000532538 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
BRPF3-210ENST00000532538 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
BRPF3-210ENST00000532538 FAM177BA6PVY3 158 aa20.2■□□□□ 0.82
BRPF3-210ENST00000532538 PRELPP51888 382 aa20.2■□□□□ 0.82
BRPF3-210ENST00000532538 KLRG1Q96E93 195 aa20.2■□□□□ 0.82
BRPF3-210ENST00000532538 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
BRPF3-210ENST00000532538 MASTLQ96GX5 879 aa20.19■□□□□ 0.82
BRPF3-210ENST00000532538 TAOK3Q9H2K8 898 aa20.19■□□□□ 0.82
BRPF3-210ENST00000532538 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
BRPF3-210ENST00000532538 STYK1Q6J9G0 422 aa20.18■□□□□ 0.82
BRPF3-210ENST00000532538 SOGA3Q5TF21 947 aa20.17■□□□□ 0.82
BRPF3-210ENST00000532538 PRPF40BQ6NWY9 871 aaKnown RBP20.17■□□□□ 0.82
BRPF3-210ENST00000532538 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
BRPF3-210ENST00000532538 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
BRPF3-210ENST00000532538 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
BRPF3-210ENST00000532538 NGEFQ8N5V2 710 aa20.16■□□□□ 0.82
BRPF3-210ENST00000532538 MIS18AQ9NYP9 233 aa20.16■□□□□ 0.82
BRPF3-210ENST00000532538 HTATSF1O43719 755 aaKnown RBP20.15■□□□□ 0.82
BRPF3-210ENST00000532538 SRGNP10124 158 aa20.15■□□□□ 0.82
BRPF3-210ENST00000532538 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
BRPF3-210ENST00000532538 LAMB4A4D0S4 1761 aa20.15■□□□□ 0.82
BRPF3-210ENST00000532538 NUP98P52948 1817 aa20.13■□□□□ 0.81
BRPF3-210ENST00000532538 NPR1P16066 1061 aa20.12■□□□□ 0.81
BRPF3-210ENST00000532538 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
BRPF3-210ENST00000532538 DDNO94850 711 aaPredicted RBP20.11■□□□□ 0.81
BRPF3-210ENST00000532538 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
BRPF3-210ENST00000532538 PNISRQ8TF01 805 aaKnown RBP20.11■□□□□ 0.81
BRPF3-210ENST00000532538 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
BRPF3-210ENST00000532538 NBPF26B4DH59 902 aa20.1■□□□□ 0.81
BRPF3-210ENST00000532538 NBPF10Q6P3W6 841 aaKnown RBP20.1■□□□□ 0.81
BRPF3-210ENST00000532538 NBPF15Q8N660 670 aa20.1■□□□□ 0.81
BRPF3-210ENST00000532538 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
BRPF3-210ENST00000532538 KDM3BQ7LBC6 1761 aa20.09■□□□□ 0.81
BRPF3-210ENST00000532538 KIF6Q6ZMV9 814 aa20.09■□□□□ 0.81
BRPF3-210ENST00000532538 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
BRPF3-210ENST00000532538 POTECB2RU33 542 aa20.08■□□□□ 0.81
BRPF3-210ENST00000532538 MYL6BP14649 208 aa20.08■□□□□ 0.81
BRPF3-210ENST00000532538 HLFQ16534 295 aa20.08■□□□□ 0.81
BRPF3-210ENST00000532538 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
BRPF3-210ENST00000532538 SCN4AP35499 1836 aa20.07■□□□□ 0.8
BRPF3-210ENST00000532538 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
BRPF3-210ENST00000532538 CHADLQ6NUI6 762 aa20.07■□□□□ 0.8
BRPF3-210ENST00000532538 NYXQ9GZU5 481 aa20.07■□□□□ 0.8
BRPF3-210ENST00000532538 IQCA1LA6NCM1 817 aa20.06■□□□□ 0.8
BRPF3-210ENST00000532538 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
BRPF3-210ENST00000532538 FKBP4Q02790 459 aaKnown RBP eCLIP20.05■□□□□ 0.8
BRPF3-210ENST00000532538 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
BRPF3-210ENST00000532538 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
BRPF3-210ENST00000532538 CLEC11AQ9Y240 323 aa20.05■□□□□ 0.8
BRPF3-210ENST00000532538 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
BRPF3-210ENST00000532538 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
BRPF3-210ENST00000532538 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
BRPF3-210ENST00000532538 RPGRQ92834 1020 aaKnown RBP20.04■□□□□ 0.8
BRPF3-210ENST00000532538 RGL2O15211 777 aa20.03■□□□□ 0.8
BRPF3-210ENST00000532538 GPTP24298 496 aa20.03■□□□□ 0.8
BRPF3-210ENST00000532538 COL13A1Q5TAT6 717 aaPredicted RBP20.03■□□□□ 0.8
BRPF3-210ENST00000532538 OLFM4Q6UX06 510 aa20.03■□□□□ 0.8
BRPF3-210ENST00000532538 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
BRPF3-210ENST00000532538 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.8
BRPF3-210ENST00000532538 CAPN15O75808 1086 aa20.02■□□□□ 0.8
BRPF3-210ENST00000532538 POTEIP0CG38 1075 aa20.02■□□□□ 0.8
BRPF3-210ENST00000532538 POTEJP0CG39 1038 aa20.02■□□□□ 0.8
BRPF3-210ENST00000532538 EIF4A1P60842 406 aaKnown RBP20.02■□□□□ 0.8
BRPF3-210ENST00000532538 ERVV-1B6SEH8 477 aa20.01■□□□□ 0.79
BRPF3-210ENST00000532538 HSPA1AP0DMV8 641 aaKnown RBP20.01■□□□□ 0.79
BRPF3-210ENST00000532538 HSPA1BP0DMV9 641 aaKnown RBP20.01■□□□□ 0.79
BRPF3-210ENST00000532538 TTLL7Q6ZT98 887 aa20.01■□□□□ 0.79
BRPF3-210ENST00000532538 TNS4Q8IZW8 715 aa20.01■□□□□ 0.79
BRPF3-210ENST00000532538 SYNE4Q8N205 404 aa20.01■□□□□ 0.79
BRPF3-210ENST00000532538 C7orf43Q8WVR3 580 aa20.01■□□□□ 0.79
BRPF3-210ENST00000532538 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
BRPF3-210ENST00000532538 KLRG2A4D1S0 409 aaPredicted RBP20■□□□□ 0.79
BRPF3-210ENST00000532538 TCERG1O14776 1098 aaKnown RBP20■□□□□ 0.79
BRPF3-210ENST00000532538 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
BRPF3-210ENST00000532538 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
BRPF3-210ENST00000532538 LDHDQ86WU2 507 aa20■□□□□ 0.79
BRPF3-210ENST00000532538 JDP2Q8WYK2 163 aa20■□□□□ 0.79
BRPF3-210ENST00000532538 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
BRPF3-210ENST00000532538 TSPYL4Q9UJ04 414 aa20■□□□□ 0.79
BRPF3-210ENST00000532538 TMX4Q9H1E5 349 aaPredicted RBP19.99■□□□□ 0.79
BRPF3-210ENST00000532538 TAF1DQ9H5J8 278 aaPredicted RBP19.99■□□□□ 0.79
BRPF3-210ENST00000532538 CREBZFQ9NS37 354 aa19.99■□□□□ 0.79
BRPF3-210ENST00000532538 HACL1Q9UJ83 578 aa19.99■□□□□ 0.79
BRPF3-210ENST00000532538 ZNF541Q9H0D2 1346 aa19.99■□□□□ 0.79
BRPF3-210ENST00000532538 RBM17Q96I25 401 aaKnown RBP19.98■□□□□ 0.79
BRPF3-210ENST00000532538 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
BRPF3-210ENST00000532538 EIF6P56537 245 aaKnown RBP19.97■□□□□ 0.79
BRPF3-210ENST00000532538 RIPK4P57078 832 aa19.97■□□□□ 0.79
BRPF3-210ENST00000532538 PPP1R42Q7Z4L9 355 aa19.97■□□□□ 0.79
BRPF3-210ENST00000532538 GJA3Q9Y6H8 435 aa19.97■□□□□ 0.79
BRPF3-210ENST00000532538 EPHX2P34913 555 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms