RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 INTS5Q6P9B9 1019 aaKnown RBP14.32□□□□□ -0.12
SMPD1-207ENST00000532367 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
SMPD1-207ENST00000532367 MEIS3Q99687 375 aa14.32□□□□□ -0.12
SMPD1-207ENST00000532367 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-207ENST00000532367 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-207ENST00000532367 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-207ENST00000532367 RREB1Q92766 1687 aa14.31□□□□□ -0.12
SMPD1-207ENST00000532367 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
SMPD1-207ENST00000532367 RC3H1Q5TC82 1133 aaKnown RBP14.31□□□□□ -0.12
SMPD1-207ENST00000532367 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
SMPD1-207ENST00000532367 MYD88Q99836 296 aa14.31□□□□□ -0.12
SMPD1-207ENST00000532367 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
SMPD1-207ENST00000532367 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
SMPD1-207ENST00000532367 IBTKQ9P2D0 1353 aaPredicted RBP14.31□□□□□ -0.12
SMPD1-207ENST00000532367 GNAI2P04899 355 aa14.3□□□□□ -0.12
SMPD1-207ENST00000532367 EIF5P55010 431 aaKnown RBP14.3□□□□□ -0.12
SMPD1-207ENST00000532367 LINC00116Q8NCU8 138 aa14.3□□□□□ -0.12
SMPD1-207ENST00000532367 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
SMPD1-207ENST00000532367 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
SMPD1-207ENST00000532367 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
SMPD1-207ENST00000532367 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-207ENST00000532367 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-207ENST00000532367 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-207ENST00000532367 ARXQ96QS3 562 aa14.29□□□□□ -0.12
SMPD1-207ENST00000532367 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
SMPD1-207ENST00000532367 C9orf78Q9NZ63 289 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-207ENST00000532367 KDM2BQ8NHM5 1336 aa14.29□□□□□ -0.12
SMPD1-207ENST00000532367 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
SMPD1-207ENST00000532367 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
SMPD1-207ENST00000532367 A0A087WZG4 1122 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 IGHDP01880 384 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 IGKV5-2P06315 115 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
SMPD1-207ENST00000532367 CWF19L2Q2TBE0 894 aaKnown RBP14.28□□□□□ -0.12
SMPD1-207ENST00000532367 HSP90AB3PQ58FF7 597 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 SLC27A3Q5K4L6 730 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 MAP3K15Q6ZN16 1313 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
SMPD1-207ENST00000532367 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.12
SMPD1-207ENST00000532367 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.12
SMPD1-207ENST00000532367 KCNQ4P56696 695 aa14.27□□□□□ -0.13
SMPD1-207ENST00000532367 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
SMPD1-207ENST00000532367 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
SMPD1-207ENST00000532367 ANKRD44Q8N8A2 993 aa14.27□□□□□ -0.13
SMPD1-207ENST00000532367 UTYO14607 1347 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 GRM8O00222 908 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 PLSCR1O15162 318 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 GCKRQ14397 625 aa14.26□□□□□ -0.13
SMPD1-207ENST00000532367 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
SMPD1-207ENST00000532367 APBA3O96018 575 aa14.25□□□□□ -0.13
SMPD1-207ENST00000532367 NBPF7P0C2Y1 421 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-207ENST00000532367 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
SMPD1-207ENST00000532367 CEP85Q6P2H3 762 aa14.25□□□□□ -0.13
SMPD1-207ENST00000532367 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
SMPD1-207ENST00000532367 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
SMPD1-207ENST00000532367 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-207ENST00000532367 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
SMPD1-207ENST00000532367 LRRFIP2Q9Y608 721 aaKnown RBP14.25□□□□□ -0.13
SMPD1-207ENST00000532367 COL15A1P39059 1388 aa14.24□□□□□ -0.13
SMPD1-207ENST00000532367 HMMRO75330 724 aa14.24□□□□□ -0.13
SMPD1-207ENST00000532367 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
SMPD1-207ENST00000532367 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
SMPD1-207ENST00000532367 NUP98P52948 1817 aa14.24□□□□□ -0.13
SMPD1-207ENST00000532367 GNPATO15228 680 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 HLFQ16534 295 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 TXNRD1Q16881 649 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 AK7Q96M32 723 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
SMPD1-207ENST00000532367 C4BP0C0L5 1744 aa14.23□□□□□ -0.13
SMPD1-207ENST00000532367 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 RGL2O15211 777 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 SMC5Q8IY18 1101 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
SMPD1-207ENST00000532367 H7C1W4 665 aa14.21□□□□□ -0.13
SMPD1-207ENST00000532367 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
SMPD1-207ENST00000532367 PROM2Q8N271 834 aa14.21□□□□□ -0.13
SMPD1-207ENST00000532367 EP400Q96L91 3159 aa14.21□□□□□ -0.14
SMPD1-207ENST00000532367 TNS1Q9HBL0 1735 aaKnown RBP14.21□□□□□ -0.14
SMPD1-207ENST00000532367 TRAPPC3LQ5T215 181 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 NLRP10Q86W26 655 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 ZNF34Q8IZ26 560 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 SUCLG2Q96I99 432 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 NARFQ9UHQ1 456 aa14.2□□□□□ -0.14
SMPD1-207ENST00000532367 CASP7P55210 303 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 MTX1Q13505 466 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 SSH3Q8TE77 659 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
SMPD1-207ENST00000532367 BCORQ6W2J9 1755 aa14.19□□□□□ -0.14
SMPD1-207ENST00000532367 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms