RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
SRPRA-206ENST00000532259 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
SRPRA-206ENST00000532259 NEXNQ0ZGT2 675 aa18.69■□□□□ 0.58
SRPRA-206ENST00000532259 PIGBQ92521 554 aa18.69■□□□□ 0.58
SRPRA-206ENST00000532259 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
SRPRA-206ENST00000532259 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
SRPRA-206ENST00000532259 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
SRPRA-206ENST00000532259 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
SRPRA-206ENST00000532259 MTX1Q13505 466 aa18.68■□□□□ 0.58
SRPRA-206ENST00000532259 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
SRPRA-206ENST00000532259 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
SRPRA-206ENST00000532259 SIL1Q9H173 461 aa18.68■□□□□ 0.58
SRPRA-206ENST00000532259 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
SRPRA-206ENST00000532259 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
SRPRA-206ENST00000532259 CASC1Q6TDU7 716 aa18.67■□□□□ 0.58
SRPRA-206ENST00000532259 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
SRPRA-206ENST00000532259 UTYO14607 1347 aa18.67■□□□□ 0.58
SRPRA-206ENST00000532259 RAB11FIP3O75154 756 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 UBE3BQ7Z3V4 1068 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 KIF1BPQ96EK5 621 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 CERKQ8TCT0 537 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
SRPRA-206ENST00000532259 AHDC1Q5TGY3 1603 aaPredicted RBP18.66■□□□□ 0.58
SRPRA-206ENST00000532259 USP26Q9BXU7 913 aa18.65■□□□□ 0.58
SRPRA-206ENST00000532259 A0A0G2JS52 829 aa18.65■□□□□ 0.58
SRPRA-206ENST00000532259 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
SRPRA-206ENST00000532259 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.58
SRPRA-206ENST00000532259 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.58
SRPRA-206ENST00000532259 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
SRPRA-206ENST00000532259 PI4K2BQ8TCG2 481 aa18.64■□□□□ 0.57
SRPRA-206ENST00000532259 ARXQ96QS3 562 aa18.64■□□□□ 0.57
SRPRA-206ENST00000532259 IL25Q9H293 177 aa18.64■□□□□ 0.57
SRPRA-206ENST00000532259 ATG3Q9NT62 314 aa18.64■□□□□ 0.57
SRPRA-206ENST00000532259 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
SRPRA-206ENST00000532259 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 A0A087WZG4 1122 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 SASH1O94885 1247 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 MYT1Q01538 1121 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
SRPRA-206ENST00000532259 TUBGCP6Q96RT7 1819 aa18.62■□□□□ 0.57
SRPRA-206ENST00000532259 LAMB4A4D0S4 1761 aa18.62■□□□□ 0.57
SRPRA-206ENST00000532259 ARFGEF2Q9Y6D5 1785 aa18.62■□□□□ 0.57
SRPRA-206ENST00000532259 ERC2O15083 957 aa18.62■□□□□ 0.57
SRPRA-206ENST00000532259 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
SRPRA-206ENST00000532259 DEKP35659 375 aaKnown RBP18.61■□□□□ 0.57
SRPRA-206ENST00000532259 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
SRPRA-206ENST00000532259 EXOC5O00471 708 aa18.61■□□□□ 0.57
SRPRA-206ENST00000532259 CHMLP26374 656 aa18.61■□□□□ 0.57
SRPRA-206ENST00000532259 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
SRPRA-206ENST00000532259 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
SRPRA-206ENST00000532259 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
SRPRA-206ENST00000532259 TLR7Q9NYK1 1049 aaKnown RBP18.6■□□□□ 0.57
SRPRA-206ENST00000532259 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
SRPRA-206ENST00000532259 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
SRPRA-206ENST00000532259 AACSQ86V21 672 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
SRPRA-206ENST00000532259 ANO2Q9NQ90 1003 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 REC8O95072 547 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
SRPRA-206ENST00000532259 CASP7P55210 303 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 G3BP1Q13283 466 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■□□□ 14.1
SRPRA-206ENST00000532259 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
SRPRA-206ENST00000532259 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 CHMP3Q9Y3E7 222 aa18.59■□□□□ 0.57
SRPRA-206ENST00000532259 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.57
SRPRA-206ENST00000532259 ITGB4P16144 1822 aa18.58■□□□□ 0.56
SRPRA-206ENST00000532259 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
SRPRA-206ENST00000532259 TOM1O60784 492 aa18.57■□□□□ 0.56
SRPRA-206ENST00000532259 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
SRPRA-206ENST00000532259 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
SRPRA-206ENST00000532259 SNX21Q969T3 373 aa18.57■□□□□ 0.56
SRPRA-206ENST00000532259 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
SRPRA-206ENST00000532259 CCDC9Q9Y3X0 531 aaKnown RBP18.57■□□□□ 0.56
SRPRA-206ENST00000532259 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
SRPRA-206ENST00000532259 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
SRPRA-206ENST00000532259 BCL9O00512 1426 aa18.56■□□□□ 0.56
SRPRA-206ENST00000532259 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
SRPRA-206ENST00000532259 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
SRPRA-206ENST00000532259 AOX1Q06278 1338 aa18.55■□□□□ 0.56
SRPRA-206ENST00000532259 PLCH1Q4KWH8 1693 aa18.55■□□□□ 0.56
SRPRA-206ENST00000532259 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
SRPRA-206ENST00000532259 H7C1W4 665 aa18.54■□□□□ 0.56
SRPRA-206ENST00000532259 K7ELQ4 463 aaPredicted RBP18.54■□□□□ 0.56
SRPRA-206ENST00000532259 FOXO4P98177 505 aa18.54■□□□□ 0.56
SRPRA-206ENST00000532259 CWC25Q9NXE8 425 aaPredicted RBP18.54■□□□□ 0.56
SRPRA-206ENST00000532259 RABL6Q3YEC7 729 aaPredicted RBP18.54■□□□□ 0.56
SRPRA-206ENST00000532259 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
SRPRA-206ENST00000532259 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
SRPRA-206ENST00000532259 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
SRPRA-206ENST00000532259 DDB1Q16531 1140 aa18.53■□□□□ 0.56
SRPRA-206ENST00000532259 ECHDC1Q9NTX5 307 aa18.53■□□□□ 0.56
SRPRA-206ENST00000532259 NUP188Q5SRE5 1749 aa18.53■□□□□ 0.56
SRPRA-206ENST00000532259 RABEP1Q15276 862 aa18.52■□□□□ 0.56
SRPRA-206ENST00000532259 SYNE4Q8N205 404 aa18.52■□□□□ 0.56
SRPRA-206ENST00000532259 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
SRPRA-206ENST00000532259 USP42Q9H9J4 1324 aaKnown RBP18.52■□□□□ 0.56
SRPRA-206ENST00000532259 TFCP2Q12800 502 aa18.52■□□□□ 0.56
SRPRA-206ENST00000532259 CNTROBQ8N137 903 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms